Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 AC021723.1-201ENST00000486306 515 ntBASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 AC022217.1-201ENST00000521069 738 ntBASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 AC140658.4-201ENST00000561990 352 ntBASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 PAM16-211ENST00000575848 518 ntTSL 3 BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 AC005324.6-201ENST00000587972 613 ntBASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 DIO1-215ENST00000610607 796 ntTSL 5 BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 C1R-201ENST00000535233 2211 ntTSL 2 BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 MIR663B-201ENST00000408361 115 ntBASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 ATP5G2P4-201ENST00000442175 420 ntBASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 KRT18P15-201ENST00000458108 1291 ntBASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 PGAM1P5-201ENST00000548011 764 ntBASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC11.35□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms