Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RFWD3Q6PCD5 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC14.95□□□□□ -0.02
RFWD3Q6PCD5 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFWD3Q6PCD5 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RFWD3Q6PCD5 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFWD3Q6PCD5 AC097376.2-205ENST00000610159 5334 ntBASIC14.95□□□□□ -0.02
RFWD3Q6PCD5 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFWD3Q6PCD5 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
RFWD3Q6PCD5 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC14.95□□□□□ -0.02
RFWD3Q6PCD5 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFWD3Q6PCD5 NUP210P1-202ENST00000504322 710 ntBASIC14.95□□□□□ -0.02
RFWD3Q6PCD5 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
RFWD3Q6PCD5 AC245884.6-201ENST00000515672 1067 ntBASIC14.95□□□□□ -0.02
RFWD3Q6PCD5 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.95□□□□□ -0.02
RFWD3Q6PCD5 AC005586.2-201ENST00000563946 837 ntBASIC14.95□□□□□ -0.02
RFWD3Q6PCD5 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RFWD3Q6PCD5 AL606495.2-201ENST00000605867 535 ntBASIC14.95□□□□□ -0.02
RFWD3Q6PCD5 CU633904.3-201ENST00000624042 1029 ntBASIC14.95□□□□□ -0.02
RFWD3Q6PCD5 PPA1-206ENST00000625364 644 ntTSL 5 BASIC14.95□□□□□ -0.02
RFWD3Q6PCD5 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFWD3Q6PCD5 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.95□□□□□ -0.02
RFWD3Q6PCD5 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RFWD3Q6PCD5 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFWD3Q6PCD5 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFWD3Q6PCD5 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RFWD3Q6PCD5 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.95□□□□□ -0.02
RFWD3Q6PCD5 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RFWD3Q6PCD5 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFWD3Q6PCD5 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.95□□□□□ -0.02
RFWD3Q6PCD5 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFWD3Q6PCD5 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFWD3Q6PCD5 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RFWD3Q6PCD5 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
RFWD3Q6PCD5 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFWD3Q6PCD5 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFWD3Q6PCD5 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFWD3Q6PCD5 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.95□□□□□ -0.02
RFWD3Q6PCD5 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC14.94□□□□□ -0.02
RFWD3Q6PCD5 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RFWD3Q6PCD5 NUTM2HP-201ENST00000442076 2498 ntBASIC14.94□□□□□ -0.02
RFWD3Q6PCD5 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.94□□□□□ -0.02
RFWD3Q6PCD5 STK26-204ENST00000481105 1835 ntTSL 2 BASIC14.94□□□□□ -0.02
RFWD3Q6PCD5 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.94□□□□□ -0.02
RFWD3Q6PCD5 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFWD3Q6PCD5 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFWD3Q6PCD5 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
RFWD3Q6PCD5 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFWD3Q6PCD5 AC019294.4-201ENST00000561777 2905 ntBASIC14.94□□□□□ -0.02
RFWD3Q6PCD5 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.94□□□□□ -0.02
RFWD3Q6PCD5 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFWD3Q6PCD5 RN7SL832P-201ENST00000607781 1756 ntBASIC14.94□□□□□ -0.02
RFWD3Q6PCD5 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
RFWD3Q6PCD5 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFWD3Q6PCD5 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC14.94□□□□□ -0.02
RFWD3Q6PCD5 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFWD3Q6PCD5 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFWD3Q6PCD5 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC14.94□□□□□ -0.02
RFWD3Q6PCD5 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC14.94□□□□□ -0.02
RFWD3Q6PCD5 AL133466.1-201ENST00000447582 150 ntBASIC14.94□□□□□ -0.02
RFWD3Q6PCD5 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
RFWD3Q6PCD5 AC073150.1-201ENST00000450406 1084 ntBASIC14.94□□□□□ -0.02
RFWD3Q6PCD5 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC14.94□□□□□ -0.02
RFWD3Q6PCD5 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC14.94□□□□□ -0.02
RFWD3Q6PCD5 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFWD3Q6PCD5 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC14.94□□□□□ -0.02
RFWD3Q6PCD5 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC14.94□□□□□ -0.02
RFWD3Q6PCD5 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC14.94□□□□□ -0.02
RFWD3Q6PCD5 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC14.94□□□□□ -0.02
RFWD3Q6PCD5 AF254983.2-201ENST00000612331 135 ntBASIC14.94□□□□□ -0.02
RFWD3Q6PCD5 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RFWD3Q6PCD5 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFWD3Q6PCD5 LINC01165-201ENST00000445190 1623 ntBASIC14.94□□□□□ -0.02
RFWD3Q6PCD5 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC14.94□□□□□ -0.02
RFWD3Q6PCD5 AC012617.1-204ENST00000586340 2305 ntBASIC14.94□□□□□ -0.02
RFWD3Q6PCD5 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RFWD3Q6PCD5 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFWD3Q6PCD5 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RFWD3Q6PCD5 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
RFWD3Q6PCD5 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFWD3Q6PCD5 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RFWD3Q6PCD5 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFWD3Q6PCD5 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFWD3Q6PCD5 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC14.94□□□□□ -0.02
RFWD3Q6PCD5 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
RFWD3Q6PCD5 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFWD3Q6PCD5 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFWD3Q6PCD5 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFWD3Q6PCD5 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
RFWD3Q6PCD5 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC14.94□□□□□ -0.02
RFWD3Q6PCD5 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFWD3Q6PCD5 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
RFWD3Q6PCD5 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFWD3Q6PCD5 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
RFWD3Q6PCD5 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFWD3Q6PCD5 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFWD3Q6PCD5 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
RFWD3Q6PCD5 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RFWD3Q6PCD5 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RFWD3Q6PCD5 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
RFWD3Q6PCD5 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms