Protein–RNA interactions for Protein: Q6P2S7

TTC41P, Putative tetratricopeptide repeat protein 41, humanhuman

Predictions only

Length 1,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC41PQ6P2S7 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TTC41PQ6P2S7 NCLP1-201ENST00000445357 1963 ntBASIC17.26■□□□□ 0.35
TTC41PQ6P2S7 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
TTC41PQ6P2S7 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC17.26■□□□□ 0.35
TTC41PQ6P2S7 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TTC41PQ6P2S7 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC17.25■□□□□ 0.35
TTC41PQ6P2S7 AC089987.1-201ENST00000551654 2209 ntBASIC17.25■□□□□ 0.35
TTC41PQ6P2S7 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TTC41PQ6P2S7 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC17.25■□□□□ 0.35
TTC41PQ6P2S7 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC17.25■□□□□ 0.35
TTC41PQ6P2S7 NAGK-204ENST00000443872 878 ntTSL 3 BASIC17.25■□□□□ 0.35
TTC41PQ6P2S7 RPSAP15-201ENST00000448168 861 ntBASIC17.25■□□□□ 0.35
TTC41PQ6P2S7 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC17.25■□□□□ 0.35
TTC41PQ6P2S7 ALG1L13P-202ENST00000519320 584 ntBASIC17.25■□□□□ 0.35
TTC41PQ6P2S7 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TTC41PQ6P2S7 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC17.25■□□□□ 0.35
TTC41PQ6P2S7 NAT9-211ENST00000580632 799 ntTSL 3 BASIC17.25■□□□□ 0.35
TTC41PQ6P2S7 MIR4754-201ENST00000582477 89 ntBASIC17.25■□□□□ 0.35
TTC41PQ6P2S7 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
TTC41PQ6P2S7 IRF3-215ENST00000596822 823 ntTSL 3 BASIC17.25■□□□□ 0.35
TTC41PQ6P2S7 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TTC41PQ6P2S7 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TTC41PQ6P2S7 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TTC41PQ6P2S7 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TTC41PQ6P2S7 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TTC41PQ6P2S7 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
TTC41PQ6P2S7 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
TTC41PQ6P2S7 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TTC41PQ6P2S7 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TTC41PQ6P2S7 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TTC41PQ6P2S7 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC17.25■□□□□ 0.35
TTC41PQ6P2S7 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TTC41PQ6P2S7 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TTC41PQ6P2S7 SALL4P6-201ENST00000429385 1691 ntBASIC17.25■□□□□ 0.35
TTC41PQ6P2S7 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC17.25■□□□□ 0.35
TTC41PQ6P2S7 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TTC41PQ6P2S7 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TTC41PQ6P2S7 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TTC41PQ6P2S7 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC17.25■□□□□ 0.35
TTC41PQ6P2S7 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC17.25■□□□□ 0.35
TTC41PQ6P2S7 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TTC41PQ6P2S7 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TTC41PQ6P2S7 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC17.25■□□□□ 0.35
TTC41PQ6P2S7 AC008620.2-201ENST00000510294 1569 ntBASIC17.25■□□□□ 0.35
TTC41PQ6P2S7 AC067750.1-201ENST00000608826 6545 ntBASIC17.25■□□□□ 0.35
TTC41PQ6P2S7 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TTC41PQ6P2S7 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC17.25■□□□□ 0.35
TTC41PQ6P2S7 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC17.25■□□□□ 0.35
TTC41PQ6P2S7 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC17.25■□□□□ 0.35
TTC41PQ6P2S7 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
TTC41PQ6P2S7 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TTC41PQ6P2S7 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TTC41PQ6P2S7 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC17.24■□□□□ 0.35
TTC41PQ6P2S7 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TTC41PQ6P2S7 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TTC41PQ6P2S7 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC17.24■□□□□ 0.35
TTC41PQ6P2S7 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC17.24■□□□□ 0.35
TTC41PQ6P2S7 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TTC41PQ6P2S7 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC17.24■□□□□ 0.35
TTC41PQ6P2S7 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC17.24■□□□□ 0.35
TTC41PQ6P2S7 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TTC41PQ6P2S7 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC17.24■□□□□ 0.35
TTC41PQ6P2S7 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC17.24■□□□□ 0.35
TTC41PQ6P2S7 STUB1-204ENST00000564370 875 ntTSL 2 BASIC17.24■□□□□ 0.35
TTC41PQ6P2S7 AL109837.1-201ENST00000603272 613 ntBASIC17.24■□□□□ 0.35
TTC41PQ6P2S7 TP53-221ENST00000615910 1149 ntTSL 5 BASIC17.24■□□□□ 0.35
TTC41PQ6P2S7 AP001505.2-201ENST00000616815 443 ntBASIC17.24■□□□□ 0.35
TTC41PQ6P2S7 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC17.24■□□□□ 0.35
TTC41PQ6P2S7 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC17.24■□□□□ 0.35
TTC41PQ6P2S7 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC17.24■□□□□ 0.35
TTC41PQ6P2S7 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TTC41PQ6P2S7 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TTC41PQ6P2S7 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC17.24■□□□□ 0.35
TTC41PQ6P2S7 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
TTC41PQ6P2S7 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
TTC41PQ6P2S7 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TTC41PQ6P2S7 SARS-202ENST00000369923 1882 ntTSL 5 BASIC17.24■□□□□ 0.35
TTC41PQ6P2S7 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TTC41PQ6P2S7 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
TTC41PQ6P2S7 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TTC41PQ6P2S7 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
TTC41PQ6P2S7 ARHGAP23P1-201ENST00000562773 1937 ntBASIC17.24■□□□□ 0.35
TTC41PQ6P2S7 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TTC41PQ6P2S7 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TTC41PQ6P2S7 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TTC41PQ6P2S7 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC17.24■□□□□ 0.35
TTC41PQ6P2S7 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC17.24■□□□□ 0.35
TTC41PQ6P2S7 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC17.24■□□□□ 0.35
TTC41PQ6P2S7 AC097376.2-205ENST00000610159 5334 ntBASIC17.24■□□□□ 0.35
TTC41PQ6P2S7 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC17.24■□□□□ 0.35
TTC41PQ6P2S7 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TTC41PQ6P2S7 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TTC41PQ6P2S7 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TTC41PQ6P2S7 FMO6P-201ENST00000236166 1620 ntBASIC17.24■□□□□ 0.35
TTC41PQ6P2S7 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
TTC41PQ6P2S7 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TTC41PQ6P2S7 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC17.23■□□□□ 0.35
TTC41PQ6P2S7 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TTC41PQ6P2S7 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TTC41PQ6P2S7 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms