Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 AP002414.2-201ENST00000591780 3365 ntBASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 DBET-201ENST00000630918 3363 ntBASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 AC120498.5-201ENST00000561757 299 ntBASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 SULT1A3-206ENST00000563322 906 ntAPPRIS ALT1 TSL 1 (best) BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 SULT1A4-204ENST00000565290 906 ntAPPRIS ALT1 TSL 1 (best) BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 ANAPC11-214ENST00000578544 403 ntTSL 3 BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 AC010319.4-201ENST00000593957 691 ntTSL 3 BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 TXLNGY-202ENST00000407724 1000 ntTSL 3 BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 CDKN2A-AS1-201ENST00000441769 823 ntBASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 TRBV11-2-201ENST00000471935 408 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 CETN3-205ENST00000522842 664 ntTSL 2 BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 SNRPF-205ENST00000553192 552 ntTSL 4 BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 MAFG-AS1-202ENST00000583492 969 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 LINC02081-201ENST00000586185 877 ntTSL 3 BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 AC007292.1-201ENST00000594444 746 ntTSL 2 BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 AL121972.2-201ENST00000431108 556 ntTSL 4 BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 AP001092.1-201ENST00000433606 469 ntTSL 3 BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 RPL10P8-201ENST00000522888 313 ntBASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 AP001102.1-201ENST00000528959 409 ntBASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 AC004801.1-201ENST00000549557 360 ntBASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 FAM90A28P-201ENST00000596881 489 ntTSL 5 BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 BX322562.1-201ENST00000617004 561 ntBASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 AC024075.2-201ENST00000598112 1473 ntBASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 MIR611-201ENST00000384869 67 ntBASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 FTH1P18-201ENST00000412071 549 ntBASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 AL627095.1-201ENST00000414775 321 ntBASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 CA5BP1-205ENST00000435806 1064 ntBASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 CLNK-203ENST00000507719 1143 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 ABCD1P3-201ENST00000562927 605 ntBASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 AC005332.2-201ENST00000590010 930 ntBASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 Metazoa_SRP.122-201ENST00000610476 285 ntBASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 CNOT4-204ENST00000414802 1687 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 CD9-212ENST00000610354 1315 ntTSL 5 BASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 AL008638.4-201ENST00000624792 1315 ntBASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 JPT2-203ENST00000382711 894 ntTSL 4 BASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 SERF2-204ENST00000402131 586 ntTSL 2 BASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 SNRPCP15-201ENST00000424055 192 ntBASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 SNORA47-201ENST00000458862 138 ntBASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 AC007656.1-201ENST00000552238 573 ntTSL 4 BASIC9.18□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms