Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB1P98172 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB1P98172 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
EFNB1P98172 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB1P98172 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC12.74□□□□□ -0.37
EFNB1P98172 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB1P98172 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB1P98172 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
EFNB1P98172 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB1P98172 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB1P98172 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC12.74□□□□□ -0.37
EFNB1P98172 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB1P98172 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
EFNB1P98172 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC12.74□□□□□ -0.37
EFNB1P98172 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC12.74□□□□□ -0.37
EFNB1P98172 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB1P98172 SLC25A47P1-201ENST00000531577 414 ntBASIC12.74□□□□□ -0.37
EFNB1P98172 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC12.74□□□□□ -0.37
EFNB1P98172 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC12.74□□□□□ -0.37
EFNB1P98172 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC12.74□□□□□ -0.37
EFNB1P98172 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB1P98172 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
EFNB1P98172 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB1P98172 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB1P98172 AC067750.1-201ENST00000608826 6545 ntBASIC12.74□□□□□ -0.37
EFNB1P98172 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
EFNB1P98172 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB1P98172 KCP-203ENST00000610776 5108 ntTSL 5 BASIC12.74□□□□□ -0.37
EFNB1P98172 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
EFNB1P98172 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB1P98172 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB1P98172 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB1P98172 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB1P98172 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC12.74□□□□□ -0.37
EFNB1P98172 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB1P98172 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB1P98172 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB1P98172 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
EFNB1P98172 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
EFNB1P98172 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
EFNB1P98172 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
EFNB1P98172 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC12.73□□□□□ -0.37
EFNB1P98172 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC12.73□□□□□ -0.37
EFNB1P98172 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
EFNB1P98172 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
EFNB1P98172 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC12.73□□□□□ -0.37
EFNB1P98172 AL118506.1-201ENST00000601296 3082 ntBASIC12.73□□□□□ -0.37
EFNB1P98172 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC12.73□□□□□ -0.37
EFNB1P98172 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
EFNB1P98172 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
EFNB1P98172 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
EFNB1P98172 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
EFNB1P98172 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
EFNB1P98172 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
EFNB1P98172 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
EFNB1P98172 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
EFNB1P98172 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
EFNB1P98172 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
EFNB1P98172 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
EFNB1P98172 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC12.73□□□□□ -0.37
EFNB1P98172 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
EFNB1P98172 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
EFNB1P98172 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
EFNB1P98172 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC12.73□□□□□ -0.37
EFNB1P98172 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
EFNB1P98172 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
EFNB1P98172 KLF2P1-201ENST00000447438 1042 ntBASIC12.73□□□□□ -0.37
EFNB1P98172 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC12.73□□□□□ -0.37
EFNB1P98172 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC12.73□□□□□ -0.37
EFNB1P98172 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
EFNB1P98172 CYMP-203ENST00000474680 1263 ntBASIC12.73□□□□□ -0.37
EFNB1P98172 AC190387.1-201ENST00000551683 408 ntBASIC12.73□□□□□ -0.37
EFNB1P98172 AC140658.4-201ENST00000561990 352 ntBASIC12.73□□□□□ -0.37
EFNB1P98172 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC12.73□□□□□ -0.37
EFNB1P98172 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC12.73□□□□□ -0.37
EFNB1P98172 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
EFNB1P98172 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
EFNB1P98172 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
EFNB1P98172 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
EFNB1P98172 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC12.73□□□□□ -0.37
EFNB1P98172 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
EFNB1P98172 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
EFNB1P98172 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
EFNB1P98172 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
EFNB1P98172 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC12.73□□□□□ -0.37
EFNB1P98172 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC12.73□□□□□ -0.37
EFNB1P98172 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
EFNB1P98172 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC12.73□□□□□ -0.37
EFNB1P98172 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
EFNB1P98172 CYP4F23P-201ENST00000593402 1579 ntBASIC12.73□□□□□ -0.37
EFNB1P98172 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
EFNB1P98172 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
EFNB1P98172 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB1P98172 AL354989.2-201ENST00000435838 1540 ntBASIC12.72□□□□□ -0.37
EFNB1P98172 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC12.72□□□□□ -0.37
EFNB1P98172 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC12.72□□□□□ -0.37
EFNB1P98172 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC12.72□□□□□ -0.37
EFNB1P98172 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
EFNB1P98172 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC12.72□□□□□ -0.37
EFNB1P98172 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms