Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.72■□□□□ 0.27
IRX3P78415 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC16.72■□□□□ 0.27
IRX3P78415 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
IRX3P78415 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IRX3P78415 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
IRX3P78415 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IRX3P78415 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC16.72■□□□□ 0.27
IRX3P78415 LINC00552-201ENST00000625151 2579 ntBASIC16.72■□□□□ 0.27
IRX3P78415 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
IRX3P78415 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IRX3P78415 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC16.72■□□□□ 0.27
IRX3P78415 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
IRX3P78415 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC16.72■□□□□ 0.27
IRX3P78415 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
IRX3P78415 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC16.72■□□□□ 0.27
IRX3P78415 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
IRX3P78415 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
IRX3P78415 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC16.72■□□□□ 0.27
IRX3P78415 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.72■□□□□ 0.27
IRX3P78415 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
IRX3P78415 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IRX3P78415 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IRX3P78415 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IRX3P78415 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IRX3P78415 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.72■□□□□ 0.27
IRX3P78415 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
IRX3P78415 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
IRX3P78415 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
IRX3P78415 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.71■□□□□ 0.27
IRX3P78415 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IRX3P78415 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IRX3P78415 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
IRX3P78415 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
IRX3P78415 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
IRX3P78415 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
IRX3P78415 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IRX3P78415 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC16.71■□□□□ 0.27
IRX3P78415 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
IRX3P78415 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC16.71■□□□□ 0.27
IRX3P78415 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
IRX3P78415 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IRX3P78415 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IRX3P78415 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IRX3P78415 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
IRX3P78415 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
IRX3P78415 JTB-202ENST00000356648 1040 ntTSL 2 BASIC16.71■□□□□ 0.27
IRX3P78415 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
IRX3P78415 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IRX3P78415 AL512306.1-201ENST00000432698 848 ntBASIC16.71■□□□□ 0.27
IRX3P78415 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC16.71■□□□□ 0.27
IRX3P78415 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC16.71■□□□□ 0.27
IRX3P78415 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
IRX3P78415 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
IRX3P78415 AP000911.2-201ENST00000534330 502 ntBASIC16.71■□□□□ 0.27
IRX3P78415 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC16.71■□□□□ 0.27
IRX3P78415 HERC2P11-201ENST00000562845 725 ntBASIC16.71■□□□□ 0.27
IRX3P78415 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC16.71■□□□□ 0.27
IRX3P78415 AC100756.2-201ENST00000569537 736 ntBASIC16.71■□□□□ 0.27
IRX3P78415 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC16.71■□□□□ 0.27
IRX3P78415 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC16.71■□□□□ 0.27
IRX3P78415 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC16.71■□□□□ 0.27
IRX3P78415 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
IRX3P78415 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC16.71■□□□□ 0.27
IRX3P78415 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.71■□□□□ 0.27
IRX3P78415 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IRX3P78415 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.71■□□□□ 0.27
IRX3P78415 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
IRX3P78415 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
IRX3P78415 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
IRX3P78415 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC16.71■□□□□ 0.27
IRX3P78415 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IRX3P78415 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
IRX3P78415 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
IRX3P78415 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
IRX3P78415 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
IRX3P78415 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
IRX3P78415 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC16.7■□□□□ 0.26
IRX3P78415 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.7■□□□□ 0.26
IRX3P78415 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.7■□□□□ 0.26
IRX3P78415 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
IRX3P78415 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
IRX3P78415 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.7■□□□□ 0.26
IRX3P78415 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
IRX3P78415 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
IRX3P78415 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC16.7■□□□□ 0.26
IRX3P78415 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
IRX3P78415 GUSBP10-201ENST00000417412 665 ntBASIC16.7■□□□□ 0.26
IRX3P78415 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC16.7■□□□□ 0.26
IRX3P78415 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
IRX3P78415 RPL18AP8-201ENST00000486071 528 ntBASIC16.7■□□□□ 0.26
IRX3P78415 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC16.7■□□□□ 0.26
IRX3P78415 ALG1L13P-202ENST00000519320 584 ntBASIC16.7■□□□□ 0.26
IRX3P78415 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
IRX3P78415 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC16.7■□□□□ 0.26
IRX3P78415 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC16.7■□□□□ 0.26
IRX3P78415 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC16.7■□□□□ 0.26
IRX3P78415 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC16.7■□□□□ 0.26
IRX3P78415 AC127024.7-201ENST00000625101 200 ntBASIC16.7■□□□□ 0.26
IRX3P78415 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
IRX3P78415 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms