Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC10.5□□□□□ -0.73
APOC4P55056 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC10.5□□□□□ -0.73
APOC4P55056 NOC2LP1-201ENST00000450578 752 ntBASIC10.5□□□□□ -0.73
APOC4P55056 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC10.5□□□□□ -0.73
APOC4P55056 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC10.5□□□□□ -0.73
APOC4P55056 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC10.5□□□□□ -0.73
APOC4P55056 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
APOC4P55056 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC10.5□□□□□ -0.73
APOC4P55056 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC10.5□□□□□ -0.73
APOC4P55056 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC10.5□□□□□ -0.73
APOC4P55056 AL031713.1-201ENST00000564813 661 ntBASIC10.5□□□□□ -0.73
APOC4P55056 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC10.5□□□□□ -0.73
APOC4P55056 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC10.5□□□□□ -0.73
APOC4P55056 AC016629.1-201ENST00000596579 586 ntBASIC10.5□□□□□ -0.73
APOC4P55056 AC087392.5-201ENST00000612517 489 ntBASIC10.5□□□□□ -0.73
APOC4P55056 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC10.5□□□□□ -0.73
APOC4P55056 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
APOC4P55056 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC10.5□□□□□ -0.73
APOC4P55056 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC10.5□□□□□ -0.73
APOC4P55056 AC128714.1-201ENST00000637035 887 ntBASIC10.5□□□□□ -0.73
APOC4P55056 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
APOC4P55056 AC015656.1-201ENST00000624209 3578 ntBASIC10.5□□□□□ -0.73
APOC4P55056 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC10.5□□□□□ -0.73
APOC4P55056 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
APOC4P55056 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
APOC4P55056 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
APOC4P55056 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
APOC4P55056 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
APOC4P55056 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC10.5□□□□□ -0.73
APOC4P55056 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC10.5□□□□□ -0.73
APOC4P55056 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
APOC4P55056 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
APOC4P55056 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
APOC4P55056 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
APOC4P55056 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC10.5□□□□□ -0.73
APOC4P55056 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
APOC4P55056 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
APOC4P55056 CAP2P1-201ENST00000557743 1390 ntBASIC10.5□□□□□ -0.73
APOC4P55056 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC10.5□□□□□ -0.73
APOC4P55056 MAPK10-262ENST00000641051 5738 ntBASIC10.5□□□□□ -0.73
APOC4P55056 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC10.5□□□□□ -0.73
APOC4P55056 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
APOC4P55056 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
APOC4P55056 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC10.5□□□□□ -0.73
APOC4P55056 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
APOC4P55056 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC10.5□□□□□ -0.73
APOC4P55056 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
APOC4P55056 CSPG4P11-201ENST00000560634 4910 ntBASIC10.5□□□□□ -0.73
APOC4P55056 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
APOC4P55056 DBET-201ENST00000630918 3363 ntBASIC10.49□□□□□ -0.73
APOC4P55056 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC10.49□□□□□ -0.73
APOC4P55056 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC10.49□□□□□ -0.73
APOC4P55056 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
APOC4P55056 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC10.49□□□□□ -0.73
APOC4P55056 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
APOC4P55056 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC10.49□□□□□ -0.73
APOC4P55056 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
APOC4P55056 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
APOC4P55056 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
APOC4P55056 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
APOC4P55056 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC10.49□□□□□ -0.73
APOC4P55056 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
APOC4P55056 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
APOC4P55056 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC10.49□□□□□ -0.73
APOC4P55056 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
APOC4P55056 RPS6KA2-211ENST00000510118 5992 ntTSL 2 BASIC10.49□□□□□ -0.73
APOC4P55056 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
APOC4P55056 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
APOC4P55056 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC10.49□□□□□ -0.73
APOC4P55056 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
APOC4P55056 AC026316.1-201ENST00000398900 414 ntBASIC10.49□□□□□ -0.73
APOC4P55056 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
APOC4P55056 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
APOC4P55056 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
APOC4P55056 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC10.49□□□□□ -0.73
APOC4P55056 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
APOC4P55056 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC10.49□□□□□ -0.73
APOC4P55056 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC10.49□□□□□ -0.73
APOC4P55056 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC10.49□□□□□ -0.73
APOC4P55056 CHCHD2P9-201ENST00000461726 456 ntBASIC10.49□□□□□ -0.73
APOC4P55056 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC10.49□□□□□ -0.73
APOC4P55056 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
APOC4P55056 AL512310.5-201ENST00000551999 515 ntBASIC10.49□□□□□ -0.73
APOC4P55056 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC10.49□□□□□ -0.73
APOC4P55056 PRKXP1-201ENST00000561423 1122 ntBASIC10.49□□□□□ -0.73
APOC4P55056 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
APOC4P55056 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC10.49□□□□□ -0.73
APOC4P55056 AL133499.1-201ENST00000596207 608 ntBASIC10.49□□□□□ -0.73
APOC4P55056 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC10.49□□□□□ -0.73
APOC4P55056 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC10.49□□□□□ -0.73
APOC4P55056 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC10.49□□□□□ -0.73
APOC4P55056 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC10.49□□□□□ -0.73
APOC4P55056 AF254983.2-201ENST00000612331 135 ntBASIC10.49□□□□□ -0.73
APOC4P55056 AC103691.2-201ENST00000618824 433 ntBASIC10.49□□□□□ -0.73
APOC4P55056 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC10.49□□□□□ -0.73
APOC4P55056 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
APOC4P55056 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
APOC4P55056 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
APOC4P55056 MYB-242ENST00000618728 3545 ntTSL 5 BASIC10.49□□□□□ -0.73
APOC4P55056 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC10.49□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms