Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC13.36□□□□□ -0.27
EFNA3P52797 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC13.36□□□□□ -0.27
EFNA3P52797 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
EFNA3P52797 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
EFNA3P52797 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.36□□□□□ -0.27
EFNA3P52797 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
EFNA3P52797 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
EFNA3P52797 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
EFNA3P52797 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.36□□□□□ -0.27
EFNA3P52797 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
EFNA3P52797 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
EFNA3P52797 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
EFNA3P52797 KRT18P9-201ENST00000604826 1300 ntBASIC13.36□□□□□ -0.27
EFNA3P52797 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC13.36□□□□□ -0.27
EFNA3P52797 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
EFNA3P52797 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
EFNA3P52797 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
EFNA3P52797 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC13.36□□□□□ -0.27
EFNA3P52797 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
EFNA3P52797 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.36□□□□□ -0.27
EFNA3P52797 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
EFNA3P52797 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
EFNA3P52797 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC13.36□□□□□ -0.27
EFNA3P52797 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
EFNA3P52797 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
EFNA3P52797 AC152010.1-201ENST00000415779 2006 ntBASIC13.35□□□□□ -0.27
EFNA3P52797 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
EFNA3P52797 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
EFNA3P52797 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
EFNA3P52797 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
EFNA3P52797 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
EFNA3P52797 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
EFNA3P52797 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
EFNA3P52797 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
EFNA3P52797 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
EFNA3P52797 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.35□□□□□ -0.27
EFNA3P52797 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
EFNA3P52797 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
EFNA3P52797 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
EFNA3P52797 HLA-DQB1-202ENST00000399079 1501 ntBASIC13.35□□□□□ -0.27
EFNA3P52797 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
EFNA3P52797 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
EFNA3P52797 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
EFNA3P52797 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.35□□□□□ -0.27
EFNA3P52797 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.35□□□□□ -0.27
EFNA3P52797 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
EFNA3P52797 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
EFNA3P52797 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
EFNA3P52797 MIR645-201ENST00000385283 94 ntBASIC13.35□□□□□ -0.27
EFNA3P52797 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
EFNA3P52797 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
EFNA3P52797 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC13.35□□□□□ -0.27
EFNA3P52797 FTH1P22-201ENST00000456305 520 ntBASIC13.35□□□□□ -0.27
EFNA3P52797 AC095040.1-201ENST00000513286 675 ntBASIC13.35□□□□□ -0.27
EFNA3P52797 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC13.35□□□□□ -0.27
EFNA3P52797 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
EFNA3P52797 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.35□□□□□ -0.27
EFNA3P52797 MIR4706-201ENST00000582134 82 ntBASIC13.35□□□□□ -0.27
EFNA3P52797 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC13.35□□□□□ -0.27
EFNA3P52797 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.35□□□□□ -0.27
EFNA3P52797 AC007326.1-201ENST00000604539 458 ntBASIC13.35□□□□□ -0.27
EFNA3P52797 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC13.35□□□□□ -0.27
EFNA3P52797 AC051619.9-201ENST00000623237 597 ntBASIC13.35□□□□□ -0.27
EFNA3P52797 AC009145.4-201ENST00000625119 1294 ntBASIC13.35□□□□□ -0.27
EFNA3P52797 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.35□□□□□ -0.27
EFNA3P52797 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
EFNA3P52797 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
EFNA3P52797 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
EFNA3P52797 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
EFNA3P52797 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
EFNA3P52797 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
EFNA3P52797 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
EFNA3P52797 AC007952.5-201ENST00000572818 1486 ntBASIC13.35□□□□□ -0.27
EFNA3P52797 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.35□□□□□ -0.27
EFNA3P52797 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
EFNA3P52797 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
EFNA3P52797 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
EFNA3P52797 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
EFNA3P52797 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
EFNA3P52797 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
EFNA3P52797 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.34□□□□□ -0.27
EFNA3P52797 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
EFNA3P52797 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.34□□□□□ -0.27
EFNA3P52797 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
EFNA3P52797 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC13.34□□□□□ -0.27
EFNA3P52797 AC016397.2-201ENST00000624848 1985 ntBASIC13.34□□□□□ -0.27
EFNA3P52797 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
EFNA3P52797 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
EFNA3P52797 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
EFNA3P52797 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
EFNA3P52797 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.34□□□□□ -0.27
EFNA3P52797 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
EFNA3P52797 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
EFNA3P52797 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.34□□□□□ -0.27
EFNA3P52797 AC027601.5-201ENST00000624065 2482 ntBASIC13.34□□□□□ -0.27
EFNA3P52797 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
EFNA3P52797 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
EFNA3P52797 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
EFNA3P52797 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
EFNA3P52797 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms