Protein–RNA interactions for Protein: P33778

HIST1H2BB, Histone H2B type 1-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BBP33778 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
HIST1H2BBP33778 SMAP1-203ENST00000370455 3333 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
HIST1H2BBP33778 ZSCAN31-201ENST00000344279 2619 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
HIST1H2BBP33778 Z97192.1-201ENST00000391625 3894 ntTSL 2 BASIC10.69□□□□□ -0.7
HIST1H2BBP33778 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
HIST1H2BBP33778 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
HIST1H2BBP33778 EXOC8-201ENST00000366645 5100 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
HIST1H2BBP33778 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
HIST1H2BBP33778 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC10.69□□□□□ -0.7
HIST1H2BBP33778 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
HIST1H2BBP33778 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC10.69□□□□□ -0.7
HIST1H2BBP33778 DDT-204ENST00000404092 805 ntTSL 3 BASIC10.69□□□□□ -0.7
HIST1H2BBP33778 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
HIST1H2BBP33778 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
HIST1H2BBP33778 AC132008.2-207ENST00000454517 770 ntBASIC10.69□□□□□ -0.7
HIST1H2BBP33778 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
HIST1H2BBP33778 AC105233.2-201ENST00000523697 349 ntBASIC10.69□□□□□ -0.7
HIST1H2BBP33778 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC10.69□□□□□ -0.7
HIST1H2BBP33778 AF228730.5-201ENST00000530288 346 ntBASIC10.69□□□□□ -0.7
HIST1H2BBP33778 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC10.69□□□□□ -0.7
HIST1H2BBP33778 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC10.69□□□□□ -0.7
HIST1H2BBP33778 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC10.69□□□□□ -0.7
HIST1H2BBP33778 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
HIST1H2BBP33778 AP001462.1-201ENST00000594089 452 ntBASIC10.69□□□□□ -0.7
HIST1H2BBP33778 AL591684.3-201ENST00000605187 298 ntBASIC10.69□□□□□ -0.7
HIST1H2BBP33778 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
HIST1H2BBP33778 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC10.69□□□□□ -0.7
HIST1H2BBP33778 LINC00540-203ENST00000631321 2412 ntTSL 2 BASIC10.69□□□□□ -0.7
HIST1H2BBP33778 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
HIST1H2BBP33778 AP1M1-203ENST00000444449 2311 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
HIST1H2BBP33778 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
HIST1H2BBP33778 BCL6-211ENST00000621333 3399 ntTSL 5 BASIC10.69□□□□□ -0.7
HIST1H2BBP33778 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
HIST1H2BBP33778 NLRP7-202ENST00000340844 3250 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
HIST1H2BBP33778 ERP44-201ENST00000262455 4854 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
HIST1H2BBP33778 PIGG-203ENST00000453061 3218 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
HIST1H2BBP33778 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
HIST1H2BBP33778 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
HIST1H2BBP33778 ILF3-202ENST00000407004 3671 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
HIST1H2BBP33778 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC10.69□□□□□ -0.7
HIST1H2BBP33778 ASTN1-203ENST00000367657 4187 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
HIST1H2BBP33778 STX3-207ENST00000633708 3111 ntTSL 5 BASIC10.69□□□□□ -0.7
HIST1H2BBP33778 USP39-207ENST00000450066 2086 ntTSL 2 BASIC10.69□□□□□ -0.7
HIST1H2BBP33778 DPYSL5-207ENST00000614712 5128 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
HIST1H2BBP33778 TIAM2-201ENST00000275246 2491 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
HIST1H2BBP33778 ARHGAP6-201ENST00000303025 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
HIST1H2BBP33778 MLX-203ENST00000435881 2428 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
HIST1H2BBP33778 PPP4R1-202ENST00000400555 3885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
HIST1H2BBP33778 CHST15-202ENST00000435907 4820 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
HIST1H2BBP33778 NRDC-214ENST00000544028 3819 ntTSL 5 BASIC10.68□□□□□ -0.7
HIST1H2BBP33778 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC10.68□□□□□ -0.7
HIST1H2BBP33778 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC10.68□□□□□ -0.7
HIST1H2BBP33778 ADCY5-201ENST00000309879 2841 ntTSL 2 BASIC10.68□□□□□ -0.7
HIST1H2BBP33778 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC10.68□□□□□ -0.7
HIST1H2BBP33778 ZFAT-209ENST00000520727 4686 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
HIST1H2BBP33778 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
HIST1H2BBP33778 CLK3-201ENST00000345005 1846 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
HIST1H2BBP33778 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
HIST1H2BBP33778 AC090136.3-201ENST00000520834 2704 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
HIST1H2BBP33778 SYPL2-201ENST00000369872 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
HIST1H2BBP33778 EPHB6-211ENST00000619012 4011 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
HIST1H2BBP33778 HNRNPF-202ENST00000356053 2670 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
HIST1H2BBP33778 CPT1B-203ENST00000395650 2662 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
HIST1H2BBP33778 HNRNPF-207ENST00000544000 2676 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
HIST1H2BBP33778 DAPK1-201ENST00000358077 5743 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
HIST1H2BBP33778 PISD-203ENST00000397500 2194 ntTSL 5 BASIC10.68□□□□□ -0.7
HIST1H2BBP33778 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
HIST1H2BBP33778 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
HIST1H2BBP33778 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
HIST1H2BBP33778 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
HIST1H2BBP33778 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC10.68□□□□□ -0.7
HIST1H2BBP33778 RBM17P3-201ENST00000417687 1192 ntBASIC10.68□□□□□ -0.7
HIST1H2BBP33778 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
HIST1H2BBP33778 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
HIST1H2BBP33778 MLF1-209ENST00000482628 1050 ntTSL 5 BASIC10.68□□□□□ -0.7
HIST1H2BBP33778 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC10.68□□□□□ -0.7
HIST1H2BBP33778 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
HIST1H2BBP33778 AC010203.1-204ENST00000548782 407 ntBASIC10.68□□□□□ -0.7
HIST1H2BBP33778 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC10.68□□□□□ -0.7
HIST1H2BBP33778 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC10.68□□□□□ -0.7
HIST1H2BBP33778 AL138918.1-201ENST00000568306 659 ntBASIC10.68□□□□□ -0.7
HIST1H2BBP33778 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
HIST1H2BBP33778 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC10.68□□□□□ -0.7
HIST1H2BBP33778 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
HIST1H2BBP33778 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC10.68□□□□□ -0.7
HIST1H2BBP33778 CCNC-219ENST00000627680 896 ntTSL 5 BASIC10.68□□□□□ -0.7
HIST1H2BBP33778 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC10.68□□□□□ -0.7
HIST1H2BBP33778 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
HIST1H2BBP33778 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
HIST1H2BBP33778 ATP4A-201ENST00000262623 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
HIST1H2BBP33778 PIGO-202ENST00000361778 2464 ntTSL 5 BASIC10.68□□□□□ -0.7
HIST1H2BBP33778 PIK3R5-202ENST00000447110 4495 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
HIST1H2BBP33778 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
HIST1H2BBP33778 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
HIST1H2BBP33778 ZKSCAN1-202ENST00000426572 2011 ntTSL 2 BASIC10.68□□□□□ -0.7
HIST1H2BBP33778 ATP6AP1-210ENST00000619046 2823 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
HIST1H2BBP33778 MTERF2-207ENST00000552029 3235 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
HIST1H2BBP33778 CDC6-201ENST00000209728 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
HIST1H2BBP33778 CSTF2-201ENST00000372972 1958 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
HIST1H2BBP33778 AC020917.4-201ENST00000623994 1999 ntBASIC10.68□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms