Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
HLA-DPA1P20036 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HLA-DPA1P20036 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
HLA-DPA1P20036 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
HLA-DPA1P20036 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
HLA-DPA1P20036 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HLA-DPA1P20036 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HLA-DPA1P20036 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
HLA-DPA1P20036 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
HLA-DPA1P20036 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HLA-DPA1P20036 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HLA-DPA1P20036 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
HLA-DPA1P20036 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
HLA-DPA1P20036 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DPA1P20036 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DPA1P20036 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
HLA-DPA1P20036 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
HLA-DPA1P20036 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
HLA-DPA1P20036 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DPA1P20036 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC14.45□□□□□ -0.1
HLA-DPA1P20036 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.45□□□□□ -0.1
HLA-DPA1P20036 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DPA1P20036 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DPA1P20036 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
HLA-DPA1P20036 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
HLA-DPA1P20036 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC14.45□□□□□ -0.1
HLA-DPA1P20036 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DPA1P20036 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DPA1P20036 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DPA1P20036 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DPA1P20036 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
HLA-DPA1P20036 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC14.45□□□□□ -0.1
HLA-DPA1P20036 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DPA1P20036 AC103592.1-201ENST00000394513 664 ntBASIC14.45□□□□□ -0.1
HLA-DPA1P20036 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DPA1P20036 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DPA1P20036 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC14.45□□□□□ -0.1
HLA-DPA1P20036 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.45□□□□□ -0.1
HLA-DPA1P20036 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.45□□□□□ -0.1
HLA-DPA1P20036 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC14.45□□□□□ -0.1
HLA-DPA1P20036 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC14.45□□□□□ -0.1
HLA-DPA1P20036 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC14.45□□□□□ -0.1
HLA-DPA1P20036 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC14.45□□□□□ -0.1
HLA-DPA1P20036 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC14.45□□□□□ -0.1
HLA-DPA1P20036 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC14.45□□□□□ -0.1
HLA-DPA1P20036 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.45□□□□□ -0.1
HLA-DPA1P20036 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DPA1P20036 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DPA1P20036 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DPA1P20036 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DPA1P20036 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.45□□□□□ -0.1
HLA-DPA1P20036 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DPA1P20036 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
HLA-DPA1P20036 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DPA1P20036 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DPA1P20036 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DPA1P20036 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DPA1P20036 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DPA1P20036 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DPA1P20036 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DPA1P20036 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC14.44□□□□□ -0.1
HLA-DPA1P20036 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DPA1P20036 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DPA1P20036 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DPA1P20036 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DPA1P20036 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
HLA-DPA1P20036 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DPA1P20036 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
HLA-DPA1P20036 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.44□□□□□ -0.1
HLA-DPA1P20036 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DPA1P20036 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DPA1P20036 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DPA1P20036 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DPA1P20036 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.44□□□□□ -0.1
HLA-DPA1P20036 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC14.44□□□□□ -0.1
HLA-DPA1P20036 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC14.44□□□□□ -0.1
HLA-DPA1P20036 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC14.44□□□□□ -0.1
HLA-DPA1P20036 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.44□□□□□ -0.1
HLA-DPA1P20036 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DPA1P20036 AC108725.1-201ENST00000495472 409 ntBASIC14.44□□□□□ -0.1
HLA-DPA1P20036 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC14.44□□□□□ -0.1
HLA-DPA1P20036 AC044849.1-201ENST00000519737 1188 ntBASIC14.44□□□□□ -0.1
HLA-DPA1P20036 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
HLA-DPA1P20036 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
HLA-DPA1P20036 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC14.44□□□□□ -0.1
HLA-DPA1P20036 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC14.44□□□□□ -0.1
HLA-DPA1P20036 MIR4538-201ENST00000581377 78 ntBASIC14.44□□□□□ -0.1
HLA-DPA1P20036 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC14.44□□□□□ -0.1
HLA-DPA1P20036 AL022328.3-201ENST00000607943 679 ntBASIC14.44□□□□□ -0.1
HLA-DPA1P20036 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC14.44□□□□□ -0.1
HLA-DPA1P20036 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC14.44□□□□□ -0.1
HLA-DPA1P20036 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DPA1P20036 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DPA1P20036 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
HLA-DPA1P20036 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DPA1P20036 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DPA1P20036 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DPA1P20036 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DPA1P20036 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DPA1P20036 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms