Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PRKCAP17252 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
PRKCAP17252 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
PRKCAP17252 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PRKCAP17252 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PRKCAP17252 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
PRKCAP17252 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC13.37□□□□□ -0.27
PRKCAP17252 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PRKCAP17252 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PRKCAP17252 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PRKCAP17252 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PRKCAP17252 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PRKCAP17252 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
PRKCAP17252 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.37□□□□□ -0.27
PRKCAP17252 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.37□□□□□ -0.27
PRKCAP17252 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PRKCAP17252 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
PRKCAP17252 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PRKCAP17252 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC13.36□□□□□ -0.27
PRKCAP17252 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC13.36□□□□□ -0.27
PRKCAP17252 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PRKCAP17252 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PRKCAP17252 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
PRKCAP17252 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
PRKCAP17252 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.36□□□□□ -0.27
PRKCAP17252 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PRKCAP17252 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PRKCAP17252 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PRKCAP17252 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PRKCAP17252 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
PRKCAP17252 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
PRKCAP17252 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.36□□□□□ -0.27
PRKCAP17252 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
PRKCAP17252 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
PRKCAP17252 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
PRKCAP17252 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PRKCAP17252 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PRKCAP17252 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PRKCAP17252 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PRKCAP17252 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PRKCAP17252 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PRKCAP17252 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PRKCAP17252 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PRKCAP17252 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PRKCAP17252 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.36□□□□□ -0.27
PRKCAP17252 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.36□□□□□ -0.27
PRKCAP17252 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.36□□□□□ -0.27
PRKCAP17252 AL035414.1-201ENST00000451327 857 ntBASIC13.36□□□□□ -0.27
PRKCAP17252 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC13.36□□□□□ -0.27
PRKCAP17252 AC100850.1-201ENST00000506768 649 ntBASIC13.36□□□□□ -0.27
PRKCAP17252 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.36□□□□□ -0.27
PRKCAP17252 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.36□□□□□ -0.27
PRKCAP17252 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
PRKCAP17252 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.36□□□□□ -0.27
PRKCAP17252 AC244157.2-201ENST00000616239 1006 ntBASIC13.36□□□□□ -0.27
PRKCAP17252 AC027601.3-201ENST00000622907 509 ntBASIC13.36□□□□□ -0.27
PRKCAP17252 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
PRKCAP17252 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PRKCAP17252 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
PRKCAP17252 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
PRKCAP17252 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PRKCAP17252 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
PRKCAP17252 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PRKCAP17252 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.36□□□□□ -0.27
PRKCAP17252 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
PRKCAP17252 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
PRKCAP17252 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
PRKCAP17252 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PRKCAP17252 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
PRKCAP17252 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PRKCAP17252 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC13.36□□□□□ -0.27
PRKCAP17252 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.36□□□□□ -0.27
PRKCAP17252 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.35□□□□□ -0.27
PRKCAP17252 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PRKCAP17252 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
PRKCAP17252 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
PRKCAP17252 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
PRKCAP17252 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PRKCAP17252 KRT8P28-201ENST00000433288 1390 ntBASIC13.35□□□□□ -0.27
PRKCAP17252 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PRKCAP17252 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
PRKCAP17252 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PRKCAP17252 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PRKCAP17252 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PRKCAP17252 AC215219.1-201ENST00000400706 1817 ntBASIC13.35□□□□□ -0.27
PRKCAP17252 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PRKCAP17252 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PRKCAP17252 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
PRKCAP17252 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PRKCAP17252 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.35□□□□□ -0.27
PRKCAP17252 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.35□□□□□ -0.27
PRKCAP17252 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
PRKCAP17252 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PRKCAP17252 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC13.35□□□□□ -0.27
PRKCAP17252 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
PRKCAP17252 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
PRKCAP17252 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.35□□□□□ -0.27
PRKCAP17252 CFL1-212ENST00000531413 636 ntTSL 3 BASIC13.35□□□□□ -0.27
PRKCAP17252 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
PRKCAP17252 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms