Protein–RNA interactions for Protein: P0C221

CCDC175, Coiled-coil domain-containing protein 175, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175P0C221 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
CCDC175P0C221 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC175P0C221 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC175P0C221 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
CCDC175P0C221 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC175P0C221 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC15.51■□□□□ 0.07
CCDC175P0C221 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC175P0C221 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC15.5■□□□□ 0.07
CCDC175P0C221 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC175P0C221 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC175P0C221 SLC7A15P-201ENST00000424028 1363 ntBASIC15.5■□□□□ 0.07
CCDC175P0C221 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC175P0C221 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC175P0C221 AC073869.1-201ENST00000415574 2762 ntBASIC15.5■□□□□ 0.07
CCDC175P0C221 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC15.5■□□□□ 0.07
CCDC175P0C221 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CCDC175P0C221 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC175P0C221 Z98257.2-202ENST00000641138 1548 ntBASIC15.5■□□□□ 0.07
CCDC175P0C221 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC175P0C221 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC175P0C221 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.5■□□□□ 0.07
CCDC175P0C221 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC175P0C221 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.5■□□□□ 0.07
CCDC175P0C221 INE1-201ENST00000456273 945 ntBASIC15.5■□□□□ 0.07
CCDC175P0C221 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.5■□□□□ 0.07
CCDC175P0C221 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC175P0C221 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
CCDC175P0C221 ENPP7P5-201ENST00000541031 1031 ntBASIC15.5■□□□□ 0.07
CCDC175P0C221 DUX4L27-201ENST00000554796 1261 ntBASIC15.5■□□□□ 0.07
CCDC175P0C221 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.5■□□□□ 0.07
CCDC175P0C221 ENPP7P14-201ENST00000621765 1040 ntBASIC15.5■□□□□ 0.07
CCDC175P0C221 AC093028.1-201ENST00000622998 982 ntBASIC15.5■□□□□ 0.07
CCDC175P0C221 CR392039.2-201ENST00000623182 509 ntBASIC15.5■□□□□ 0.07
CCDC175P0C221 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC175P0C221 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC175P0C221 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CCDC175P0C221 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
CCDC175P0C221 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CCDC175P0C221 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC175P0C221 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC15.5■□□□□ 0.07
CCDC175P0C221 AC026271.4-201ENST00000578214 1833 ntBASIC15.5■□□□□ 0.07
CCDC175P0C221 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC175P0C221 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC175P0C221 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CCDC175P0C221 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CCDC175P0C221 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC15.49■□□□□ 0.07
CCDC175P0C221 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
CCDC175P0C221 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CCDC175P0C221 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.49■□□□□ 0.07
CCDC175P0C221 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC175P0C221 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC175P0C221 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CCDC175P0C221 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC175P0C221 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CCDC175P0C221 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC175P0C221 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC175P0C221 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC15.49■□□□□ 0.07
CCDC175P0C221 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC175P0C221 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC175P0C221 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC15.49■□□□□ 0.07
CCDC175P0C221 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC15.49■□□□□ 0.07
CCDC175P0C221 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC175P0C221 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC15.49■□□□□ 0.07
CCDC175P0C221 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CCDC175P0C221 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC175P0C221 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC15.49■□□□□ 0.07
CCDC175P0C221 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC175P0C221 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC175P0C221 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC175P0C221 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CCDC175P0C221 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC175P0C221 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CCDC175P0C221 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC175P0C221 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.49■□□□□ 0.07
CCDC175P0C221 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC175P0C221 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.49■□□□□ 0.07
CCDC175P0C221 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
CCDC175P0C221 AC011495.1-201ENST00000498085 584 ntBASIC15.49■□□□□ 0.07
CCDC175P0C221 AC022137.2-201ENST00000503482 481 ntBASIC15.49■□□□□ 0.07
CCDC175P0C221 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.49■□□□□ 0.07
CCDC175P0C221 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.49■□□□□ 0.07
CCDC175P0C221 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.49■□□□□ 0.07
CCDC175P0C221 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
CCDC175P0C221 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.49■□□□□ 0.07
CCDC175P0C221 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.49■□□□□ 0.07
CCDC175P0C221 JPT2-214ENST00000569765 782 ntTSL 2 BASIC15.49■□□□□ 0.07
CCDC175P0C221 CLUHP6-201ENST00000580789 941 ntBASIC15.49■□□□□ 0.07
CCDC175P0C221 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC175P0C221 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC175P0C221 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC15.49■□□□□ 0.07
CCDC175P0C221 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC175P0C221 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CCDC175P0C221 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC175P0C221 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC175P0C221 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC175P0C221 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC175P0C221 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC15.49■□□□□ 0.07
CCDC175P0C221 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC175P0C221 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC175P0C221 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms