Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
RB1P06400 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC14.96□□□□□ -0.01
RB1P06400 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RB1P06400 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
RB1P06400 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.96□□□□□ -0.01
RB1P06400 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RB1P06400 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RB1P06400 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
RB1P06400 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RB1P06400 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RB1P06400 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.96□□□□□ -0.02
RB1P06400 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RB1P06400 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
RB1P06400 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RB1P06400 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RB1P06400 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
RB1P06400 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RB1P06400 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RB1P06400 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RB1P06400 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
RB1P06400 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RB1P06400 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC14.95□□□□□ -0.02
RB1P06400 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RB1P06400 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RB1P06400 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RB1P06400 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RB1P06400 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
RB1P06400 MIR600HG-201ENST00000449175 5984 ntBASIC14.95□□□□□ -0.02
RB1P06400 AC022080.1-201ENST00000366255 781 ntBASIC14.95□□□□□ -0.02
RB1P06400 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC14.95□□□□□ -0.02
RB1P06400 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
RB1P06400 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RB1P06400 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC14.95□□□□□ -0.02
RB1P06400 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RB1P06400 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RB1P06400 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC14.95□□□□□ -0.02
RB1P06400 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC14.95□□□□□ -0.02
RB1P06400 RN7SL121P-201ENST00000584223 273 ntBASIC14.95□□□□□ -0.02
RB1P06400 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RB1P06400 ESR1-214ENST00000638569 132 ntTSL 5 BASIC14.95□□□□□ -0.02
RB1P06400 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RB1P06400 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RB1P06400 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC14.95□□□□□ -0.02
RB1P06400 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RB1P06400 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.95□□□□□ -0.02
RB1P06400 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RB1P06400 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RB1P06400 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RB1P06400 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RB1P06400 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RB1P06400 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RB1P06400 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RB1P06400 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RB1P06400 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
RB1P06400 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RB1P06400 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RB1P06400 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.95□□□□□ -0.02
RB1P06400 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RB1P06400 DBET-201ENST00000630918 3363 ntBASIC14.94□□□□□ -0.02
RB1P06400 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.94□□□□□ -0.02
RB1P06400 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
RB1P06400 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RB1P06400 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RB1P06400 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
RB1P06400 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
RB1P06400 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.94□□□□□ -0.02
RB1P06400 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.94□□□□□ -0.02
RB1P06400 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RB1P06400 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RB1P06400 DUT-208ENST00000559540 1441 ntTSL 2 BASIC14.94□□□□□ -0.02
RB1P06400 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RB1P06400 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.94□□□□□ -0.02
RB1P06400 GOLGA8UP-201ENST00000527159 1755 ntBASIC14.94□□□□□ -0.02
RB1P06400 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
RB1P06400 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
RB1P06400 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
RB1P06400 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RB1P06400 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC14.94□□□□□ -0.02
RB1P06400 NALT1-202ENST00000450304 437 ntTSL 3 BASIC14.94□□□□□ -0.02
RB1P06400 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RB1P06400 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC14.94□□□□□ -0.02
RB1P06400 AC092612.1-201ENST00000514501 998 ntBASIC14.94□□□□□ -0.02
RB1P06400 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC14.94□□□□□ -0.02
RB1P06400 AC004801.1-201ENST00000549557 360 ntBASIC14.94□□□□□ -0.02
RB1P06400 EMC4-208ENST00000559078 599 ntTSL 3 BASIC14.94□□□□□ -0.02
RB1P06400 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
RB1P06400 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC14.94□□□□□ -0.02
RB1P06400 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC14.94□□□□□ -0.02
RB1P06400 URAHP-205ENST00000610227 398 ntBASIC14.94□□□□□ -0.02
RB1P06400 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
RB1P06400 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC14.94□□□□□ -0.02
RB1P06400 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.94□□□□□ -0.02
RB1P06400 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.94□□□□□ -0.02
RB1P06400 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC14.94□□□□□ -0.02
RB1P06400 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.94□□□□□ -0.02
RB1P06400 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RB1P06400 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RB1P06400 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.94□□□□□ -0.02
RB1P06400 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RB1P06400 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms