Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AL359182.1-201ENST00000435915 469 ntTSL 3 BASIC18.2■□□□□ 0.5
COL5A2P05997 SNX20-205ENST00000610485 557 ntTSL 5 BASIC18.2■□□□□ 0.5
COL5A2P05997 CLEC10A-206ENST00000576617 1800 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COL5A2P05997 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL5A2P05997 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL5A2P05997 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL5A2P05997 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL5A2P05997 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL5A2P05997 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.19■□□□□ 0.5
COL5A2P05997 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC18.19■□□□□ 0.5
COL5A2P05997 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL5A2P05997 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC18.19■□□□□ 0.5
COL5A2P05997 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC18.19■□□□□ 0.5
COL5A2P05997 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COL5A2P05997 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COL5A2P05997 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
COL5A2P05997 AC090340.1-201ENST00000620778 4980 ntBASIC18.19■□□□□ 0.5
COL5A2P05997 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL5A2P05997 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC18.19■□□□□ 0.5
COL5A2P05997 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
COL5A2P05997 TUBB4AP1-201ENST00000450755 1325 ntBASIC18.19■□□□□ 0.5
COL5A2P05997 NRG1-211ENST00000520502 1330 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COL5A2P05997 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL5A2P05997 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL5A2P05997 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COL5A2P05997 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COL5A2P05997 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL5A2P05997 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC18.19■□□□□ 0.5
COL5A2P05997 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL5A2P05997 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COL5A2P05997 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC18.19■□□□□ 0.5
COL5A2P05997 RNF181-201ENST00000306368 569 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL5A2P05997 FTH1P18-201ENST00000412071 549 ntBASIC18.19■□□□□ 0.5
COL5A2P05997 SDCBP2P1-201ENST00000416115 614 ntBASIC18.19■□□□□ 0.5
COL5A2P05997 PLA2G1B-202ENST00000423423 423 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COL5A2P05997 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COL5A2P05997 RNF181-203ENST00000441634 844 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
COL5A2P05997 AC005077.3-201ENST00000449614 213 ntBASIC18.19■□□□□ 0.5
COL5A2P05997 GYG1-209ENST00000483267 801 ntTSL 2 BASIC18.19■□□□□ 0.5
COL5A2P05997 AC122694.1-201ENST00000510987 563 ntTSL 4 BASIC18.19■□□□□ 0.5
COL5A2P05997 INCA1-204ENST00000576820 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL5A2P05997 ECSIT-211ENST00000592312 1286 ntTSL 5 BASIC18.19■□□□□ 0.5
COL5A2P05997 IFNL3P1-201ENST00000595082 501 ntBASIC18.19■□□□□ 0.5
COL5A2P05997 CLPP-205ENST00000596605 646 ntTSL 2 BASIC18.19■□□□□ 0.5
COL5A2P05997 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC18.19■□□□□ 0.5
COL5A2P05997 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC18.19■□□□□ 0.5
COL5A2P05997 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC18.19■□□□□ 0.5
COL5A2P05997 SFTPA2-205ENST00000640627 195 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COL5A2P05997 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COL5A2P05997 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COL5A2P05997 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL5A2P05997 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL5A2P05997 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL5A2P05997 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL5A2P05997 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC18.18■□□□□ 0.5
COL5A2P05997 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL5A2P05997 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
COL5A2P05997 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC18.18■□□□□ 0.5
COL5A2P05997 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL5A2P05997 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC18.18■□□□□ 0.5
COL5A2P05997 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL5A2P05997 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL5A2P05997 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
COL5A2P05997 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL5A2P05997 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL5A2P05997 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
COL5A2P05997 SUMO1-206ENST00000409368 1187 ntTSL 4 BASIC18.18■□□□□ 0.5
COL5A2P05997 TPT1P9-201ENST00000413759 514 ntBASIC18.18■□□□□ 0.5
COL5A2P05997 GHRL-206ENST00000430179 856 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL5A2P05997 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC18.18■□□□□ 0.5
COL5A2P05997 RNA5SP288-201ENST00000516075 93 ntBASIC18.18■□□□□ 0.5
COL5A2P05997 AC005736.3-201ENST00000571169 244 ntTSL 5 BASIC18.18■□□□□ 0.5
COL5A2P05997 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC18.18■□□□□ 0.5
COL5A2P05997 RPS5-205ENST00000598495 800 ntTSL 3 BASIC18.18■□□□□ 0.5
COL5A2P05997 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC18.18■□□□□ 0.5
COL5A2P05997 ZFAS1-208ENST00000618800 597 ntTSL 3 BASIC18.18■□□□□ 0.5
COL5A2P05997 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
COL5A2P05997 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL5A2P05997 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC18.18■□□□□ 0.5
COL5A2P05997 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC18.18■□□□□ 0.5
COL5A2P05997 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL5A2P05997 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COL5A2P05997 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC18.18■□□□□ 0.5
COL5A2P05997 AC092384.3-202ENST00000564646 2873 ntBASIC18.17■□□□□ 0.5
COL5A2P05997 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL5A2P05997 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
COL5A2P05997 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL5A2P05997 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL5A2P05997 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
COL5A2P05997 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL5A2P05997 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COL5A2P05997 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC18.17■□□□□ 0.5
COL5A2P05997 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
COL5A2P05997 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL5A2P05997 SERHL2-201ENST00000327678 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL5A2P05997 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL5A2P05997 LINC02433-202ENST00000507108 1395 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COL5A2P05997 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL5A2P05997 CSRP2-201ENST00000311083 943 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL5A2P05997 SAA1-202ENST00000405158 675 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms