Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
TRGV3P03979 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV3P03979 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC11.32□□□□□ -0.6
TRGV3P03979 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV3P03979 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV3P03979 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV3P03979 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV3P03979 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC11.32□□□□□ -0.6
TRGV3P03979 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV3P03979 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV3P03979 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV3P03979 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV3P03979 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV3P03979 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC11.32□□□□□ -0.6
TRGV3P03979 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV3P03979 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV3P03979 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV3P03979 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV3P03979 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV3P03979 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV3P03979 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV3P03979 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
TRGV3P03979 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV3P03979 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV3P03979 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV3P03979 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV3P03979 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV3P03979 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV3P03979 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV3P03979 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV3P03979 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV3P03979 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV3P03979 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV3P03979 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV3P03979 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC11.32□□□□□ -0.6
TRGV3P03979 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC11.32□□□□□ -0.6
TRGV3P03979 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC11.32□□□□□ -0.6
TRGV3P03979 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC11.32□□□□□ -0.6
TRGV3P03979 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC11.32□□□□□ -0.6
TRGV3P03979 AC124068.2-201ENST00000569473 1109 ntBASIC11.32□□□□□ -0.6
TRGV3P03979 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC11.32□□□□□ -0.6
TRGV3P03979 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV3P03979 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
TRGV3P03979 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV3P03979 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV3P03979 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC11.32□□□□□ -0.6
TRGV3P03979 OS9-207ENST00000439210 1946 ntTSL 2 BASIC11.32□□□□□ -0.6
TRGV3P03979 HSPA7-201ENST00000445535 1927 ntBASIC11.32□□□□□ -0.6
TRGV3P03979 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
TRGV3P03979 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV3P03979 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV3P03979 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC11.32□□□□□ -0.6
TRGV3P03979 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
TRGV3P03979 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV3P03979 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC11.32□□□□□ -0.6
TRGV3P03979 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV3P03979 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC11.32□□□□□ -0.6
TRGV3P03979 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV3P03979 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
TRGV3P03979 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV3P03979 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV3P03979 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV3P03979 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
TRGV3P03979 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC11.32□□□□□ -0.6
TRGV3P03979 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV3P03979 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV3P03979 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV3P03979 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
TRGV3P03979 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV3P03979 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
TRGV3P03979 USP4-203ENST00000415188 1454 ntTSL 3 BASIC11.32□□□□□ -0.6
TRGV3P03979 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV3P03979 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRGV3P03979 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRGV3P03979 MEX3B-202ENST00000558133 4333 ntBASIC11.31□□□□□ -0.6
TRGV3P03979 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRGV3P03979 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
TRGV3P03979 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRGV3P03979 TKT-201ENST00000296289 1931 ntTSL 5 BASIC11.31□□□□□ -0.6
TRGV3P03979 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRGV3P03979 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TRGV3P03979 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRGV3P03979 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC11.31□□□□□ -0.6
TRGV3P03979 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC11.31□□□□□ -0.6
TRGV3P03979 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRGV3P03979 HSPA8P5-201ENST00000456928 2069 ntBASIC11.31□□□□□ -0.6
TRGV3P03979 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC11.31□□□□□ -0.6
TRGV3P03979 AC018735.1-201ENST00000437208 1502 ntBASIC11.31□□□□□ -0.6
TRGV3P03979 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC11.31□□□□□ -0.6
TRGV3P03979 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC11.31□□□□□ -0.6
TRGV3P03979 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
TRGV3P03979 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRGV3P03979 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TRGV3P03979 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
TRGV3P03979 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC11.31□□□□□ -0.6
TRGV3P03979 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
TRGV3P03979 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRGV3P03979 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
TRGV3P03979 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
TRGV3P03979 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms