Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
DNMT3BQ9UBC3 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC14.81□□□□□ -0.04
DNMT3BQ9UBC3 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC14.81□□□□□ -0.04
DNMT3BQ9UBC3 PSMD4P1-201ENST00000433951 1109 ntBASIC14.81□□□□□ -0.04
DNMT3BQ9UBC3 GNG10P1-201ENST00000452289 199 ntBASIC14.81□□□□□ -0.04
DNMT3BQ9UBC3 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
DNMT3BQ9UBC3 CHCHD2P2-201ENST00000503744 321 ntBASIC14.81□□□□□ -0.04
DNMT3BQ9UBC3 IGHV1-12-201ENST00000518307 205 ntBASIC14.81□□□□□ -0.04
DNMT3BQ9UBC3 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC14.81□□□□□ -0.04
DNMT3BQ9UBC3 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC14.81□□□□□ -0.04
DNMT3BQ9UBC3 CMC2-204ENST00000562713 573 ntTSL 3 BASIC14.81□□□□□ -0.04
DNMT3BQ9UBC3 CMC2-209ENST00000565108 399 ntTSL 2 BASIC14.81□□□□□ -0.04
DNMT3BQ9UBC3 SNORD3B-1-201ENST00000577988 758 ntBASIC14.81□□□□□ -0.04
DNMT3BQ9UBC3 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC14.81□□□□□ -0.04
DNMT3BQ9UBC3 AC011247.3-201ENST00000603297 438 ntBASIC14.81□□□□□ -0.04
DNMT3BQ9UBC3 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
DNMT3BQ9UBC3 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
DNMT3BQ9UBC3 CTBP2P8-201ENST00000422584 1330 ntBASIC14.81□□□□□ -0.04
DNMT3BQ9UBC3 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
DNMT3BQ9UBC3 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.81□□□□□ -0.04
DNMT3BQ9UBC3 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.81□□□□□ -0.04
DNMT3BQ9UBC3 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
DNMT3BQ9UBC3 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
DNMT3BQ9UBC3 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC14.81□□□□□ -0.04
DNMT3BQ9UBC3 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
DNMT3BQ9UBC3 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
DNMT3BQ9UBC3 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
DNMT3BQ9UBC3 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.81□□□□□ -0.04
DNMT3BQ9UBC3 AC007952.5-201ENST00000572818 1486 ntBASIC14.81□□□□□ -0.04
DNMT3BQ9UBC3 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
DNMT3BQ9UBC3 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
DNMT3BQ9UBC3 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC14.81□□□□□ -0.04
DNMT3BQ9UBC3 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
DNMT3BQ9UBC3 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
DNMT3BQ9UBC3 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
DNMT3BQ9UBC3 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
DNMT3BQ9UBC3 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.81□□□□□ -0.04
DNMT3BQ9UBC3 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
DNMT3BQ9UBC3 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.81□□□□□ -0.04
DNMT3BQ9UBC3 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
DNMT3BQ9UBC3 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
DNMT3BQ9UBC3 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
DNMT3BQ9UBC3 AC090505.1-201ENST00000430515 1834 ntBASIC14.8□□□□□ -0.04
DNMT3BQ9UBC3 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
DNMT3BQ9UBC3 AC019109.1-201ENST00000401725 1874 ntBASIC14.8□□□□□ -0.04
DNMT3BQ9UBC3 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
DNMT3BQ9UBC3 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.8□□□□□ -0.04
DNMT3BQ9UBC3 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.8□□□□□ -0.04
DNMT3BQ9UBC3 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
DNMT3BQ9UBC3 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
DNMT3BQ9UBC3 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.8□□□□□ -0.04
DNMT3BQ9UBC3 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
DNMT3BQ9UBC3 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
DNMT3BQ9UBC3 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
DNMT3BQ9UBC3 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
DNMT3BQ9UBC3 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
DNMT3BQ9UBC3 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
DNMT3BQ9UBC3 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
DNMT3BQ9UBC3 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
DNMT3BQ9UBC3 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC14.8□□□□□ -0.04
DNMT3BQ9UBC3 ACTG1P19-201ENST00000418987 1116 ntBASIC14.8□□□□□ -0.04
DNMT3BQ9UBC3 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC14.8□□□□□ -0.04
DNMT3BQ9UBC3 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC14.8□□□□□ -0.04
DNMT3BQ9UBC3 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
DNMT3BQ9UBC3 PGAM1P12-201ENST00000505622 748 ntBASIC14.8□□□□□ -0.04
DNMT3BQ9UBC3 NSD1-211ENST00000511258 809 ntTSL 3 BASIC14.8□□□□□ -0.04
DNMT3BQ9UBC3 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
DNMT3BQ9UBC3 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
DNMT3BQ9UBC3 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
DNMT3BQ9UBC3 AL512310.5-201ENST00000551999 515 ntBASIC14.8□□□□□ -0.04
DNMT3BQ9UBC3 AL022344.2-201ENST00000568976 968 ntBASIC14.8□□□□□ -0.04
DNMT3BQ9UBC3 RN7SL455P-201ENST00000580629 282 ntBASIC14.8□□□□□ -0.04
DNMT3BQ9UBC3 AP005264.5-201ENST00000590066 467 ntBASIC14.8□□□□□ -0.04
DNMT3BQ9UBC3 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC14.8□□□□□ -0.04
DNMT3BQ9UBC3 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
DNMT3BQ9UBC3 AC091769.1-201ENST00000619576 568 ntBASIC14.8□□□□□ -0.04
DNMT3BQ9UBC3 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
DNMT3BQ9UBC3 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
DNMT3BQ9UBC3 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
DNMT3BQ9UBC3 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
DNMT3BQ9UBC3 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.8□□□□□ -0.04
DNMT3BQ9UBC3 AC015656.1-201ENST00000624209 3578 ntBASIC14.8□□□□□ -0.04
DNMT3BQ9UBC3 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
DNMT3BQ9UBC3 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.8□□□□□ -0.04
DNMT3BQ9UBC3 LINC00552-201ENST00000625151 2579 ntBASIC14.8□□□□□ -0.04
DNMT3BQ9UBC3 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.79□□□□□ -0.04
DNMT3BQ9UBC3 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
DNMT3BQ9UBC3 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
DNMT3BQ9UBC3 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
DNMT3BQ9UBC3 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
DNMT3BQ9UBC3 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
DNMT3BQ9UBC3 NHP2-202ENST00000314397 599 ntTSL 2 BASIC14.79□□□□□ -0.04
DNMT3BQ9UBC3 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
DNMT3BQ9UBC3 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.79□□□□□ -0.04
DNMT3BQ9UBC3 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
DNMT3BQ9UBC3 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
DNMT3BQ9UBC3 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
DNMT3BQ9UBC3 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
DNMT3BQ9UBC3 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
DNMT3BQ9UBC3 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms