Protein–RNA interactions for Protein: Q9BV40

VAMP8, Vesicle-associated membrane protein 8, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP8Q9BV40 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC10.38□□□□□ -0.75
VAMP8Q9BV40 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
VAMP8Q9BV40 AC096582.2-201ENST00000510860 516 ntBASIC10.38□□□□□ -0.75
VAMP8Q9BV40 PRYP6-201ENST00000514804 343 ntBASIC10.38□□□□□ -0.75
VAMP8Q9BV40 VENTXP5-201ENST00000523979 775 ntBASIC10.38□□□□□ -0.75
VAMP8Q9BV40 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
VAMP8Q9BV40 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC10.38□□□□□ -0.75
VAMP8Q9BV40 AP003071.4-201ENST00000562276 1284 ntBASIC10.38□□□□□ -0.75
VAMP8Q9BV40 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC10.38□□□□□ -0.75
VAMP8Q9BV40 AC092364.2-202ENST00000597012 1073 ntBASIC10.38□□□□□ -0.75
VAMP8Q9BV40 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC10.38□□□□□ -0.75
VAMP8Q9BV40 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC10.38□□□□□ -0.75
VAMP8Q9BV40 AL022326.1-202ENST00000641533 845 ntBASIC10.38□□□□□ -0.75
VAMP8Q9BV40 AL805961.1-202ENST00000641562 540 ntBASIC10.38□□□□□ -0.75
VAMP8Q9BV40 FLNB-204ENST00000429972 9430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
VAMP8Q9BV40 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
VAMP8Q9BV40 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
VAMP8Q9BV40 SQSTM1-201ENST00000360718 2253 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
VAMP8Q9BV40 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
VAMP8Q9BV40 ELN-201ENST00000252034 3781 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
VAMP8Q9BV40 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
VAMP8Q9BV40 LINC00563-201ENST00000566370 1400 ntBASIC10.38□□□□□ -0.75
VAMP8Q9BV40 PCDH20-201ENST00000409204 4778 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
VAMP8Q9BV40 LINC01209-201ENST00000451289 2400 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
VAMP8Q9BV40 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC10.38□□□□□ -0.75
VAMP8Q9BV40 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC10.38□□□□□ -0.75
VAMP8Q9BV40 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC10.38□□□□□ -0.75
VAMP8Q9BV40 CYP4F24P-201ENST00000586049 1580 ntBASIC10.38□□□□□ -0.75
VAMP8Q9BV40 AC241952.1-201ENST00000612480 6897 ntBASIC10.38□□□□□ -0.75
VAMP8Q9BV40 CLDN19-201ENST00000296387 2859 ntTSL 2 BASIC10.38□□□□□ -0.75
VAMP8Q9BV40 SUCLG2-201ENST00000307227 2352 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
VAMP8Q9BV40 GOLGA6L7P-201ENST00000567390 2397 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
VAMP8Q9BV40 PRAMENP-201ENST00000337471 3038 ntTSL 2 BASIC10.38□□□□□ -0.75
VAMP8Q9BV40 MTHFSD-201ENST00000360900 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
VAMP8Q9BV40 ILF3-202ENST00000407004 3671 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
VAMP8Q9BV40 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
VAMP8Q9BV40 DCAF6-203ENST00000367843 3302 ntAPPRIS P3 TSL 5 BASIC10.38□□□□□ -0.75
VAMP8Q9BV40 ANKRD27-204ENST00000587352 3301 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
VAMP8Q9BV40 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC10.38□□□□□ -0.75
VAMP8Q9BV40 PXK-210ENST00000479241 2817 ntTSL 2 BASIC10.38□□□□□ -0.75
VAMP8Q9BV40 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
VAMP8Q9BV40 TAF5L-204ENST00000366676 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
VAMP8Q9BV40 AC091178.1-201ENST00000583447 2305 ntTSL 2 BASIC10.38□□□□□ -0.75
VAMP8Q9BV40 AL713866.1-201ENST00000563320 3125 ntBASIC10.38□□□□□ -0.75
VAMP8Q9BV40 EPB41L4A-201ENST00000261486 4707 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
VAMP8Q9BV40 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
VAMP8Q9BV40 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC10.38□□□□□ -0.75
VAMP8Q9BV40 EPHA5-205ENST00000613740 8355 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
VAMP8Q9BV40 ADGRG5-202ENST00000349457 3557 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
VAMP8Q9BV40 CD36-207ENST00000432207 1808 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
VAMP8Q9BV40 ITFG1-204ENST00000544001 1849 ntTSL 2 BASIC10.37□□□□□ -0.75
VAMP8Q9BV40 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC10.37□□□□□ -0.75
VAMP8Q9BV40 SLIT2-201ENST00000273739 5132 ntTSL 5 BASIC10.37□□□□□ -0.75
VAMP8Q9BV40 RAB11FIP3-205ENST00000450428 3203 ntTSL 2 BASIC10.37□□□□□ -0.75
VAMP8Q9BV40 KIAA0513-206ENST00000566428 7772 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
VAMP8Q9BV40 CORO7-202ENST00000537233 3392 ntTSL 2 BASIC10.37□□□□□ -0.75
VAMP8Q9BV40 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC10.37□□□□□ -0.75
VAMP8Q9BV40 PAK5-203ENST00000378429 4780 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
VAMP8Q9BV40 ATP7B-203ENST00000400366 6304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
VAMP8Q9BV40 FAS-204ENST00000355740 2563 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.75
VAMP8Q9BV40 SMARCA2-258ENST00000637103 5657 ntTSL 5 BASIC10.37□□□□□ -0.75
VAMP8Q9BV40 SMARCE1-202ENST00000348513 5840 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
VAMP8Q9BV40 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
VAMP8Q9BV40 MCAM-201ENST00000264036 3313 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
VAMP8Q9BV40 MYL9-201ENST00000279022 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
VAMP8Q9BV40 DIDO1-205ENST00000370371 2833 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
VAMP8Q9BV40 TNRC6B-203ENST00000402203 3444 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
VAMP8Q9BV40 ADGRF3-202ENST00000333478 3896 ntTSL 5 BASIC10.37□□□□□ -0.75
VAMP8Q9BV40 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
VAMP8Q9BV40 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
VAMP8Q9BV40 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
VAMP8Q9BV40 AGK-201ENST00000355413 3849 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
VAMP8Q9BV40 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
VAMP8Q9BV40 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
VAMP8Q9BV40 FIS1-203ENST00000442303 631 ntTSL 3 BASIC10.37□□□□□ -0.75
VAMP8Q9BV40 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC10.37□□□□□ -0.75
VAMP8Q9BV40 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
VAMP8Q9BV40 AC098590.1-201ENST00000468126 897 ntBASIC10.37□□□□□ -0.75
VAMP8Q9BV40 HPGD-214ENST00000542498 2786 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
VAMP8Q9BV40 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC10.37□□□□□ -0.75
VAMP8Q9BV40 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC10.37□□□□□ -0.75
VAMP8Q9BV40 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC10.37□□□□□ -0.75
VAMP8Q9BV40 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC10.37□□□□□ -0.75
VAMP8Q9BV40 CCDC88A-214ENST00000621814 3089 ntTSL 5 BASIC10.37□□□□□ -0.75
VAMP8Q9BV40 SUN2-202ENST00000405510 4055 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
VAMP8Q9BV40 CDH3-202ENST00000429102 3611 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
VAMP8Q9BV40 SIGLEC11-203ENST00000447370 3173 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
VAMP8Q9BV40 MVP-201ENST00000357402 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
VAMP8Q9BV40 TTC16-201ENST00000373289 2897 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
VAMP8Q9BV40 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC10.37□□□□□ -0.75
VAMP8Q9BV40 NLRP1-202ENST00000269280 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
VAMP8Q9BV40 GPATCH2L-209ENST00000556663 2112 ntTSL 2 BASIC10.37□□□□□ -0.75
VAMP8Q9BV40 LIN28A-202ENST00000326279 4008 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
VAMP8Q9BV40 C9orf3-201ENST00000277198 1966 ntTSL 2 BASIC10.37□□□□□ -0.75
VAMP8Q9BV40 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
VAMP8Q9BV40 MED29-207ENST00000615911 3565 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
VAMP8Q9BV40 NUAK2-201ENST00000367157 3441 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
VAMP8Q9BV40 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC10.37□□□□□ -0.75
VAMP8Q9BV40 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
VAMP8Q9BV40 ARHGEF2-203ENST00000361247 4149 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms