Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
SRFBP1Q8NEF9 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SRFBP1Q8NEF9 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SRFBP1Q8NEF9 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SRFBP1Q8NEF9 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SRFBP1Q8NEF9 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SRFBP1Q8NEF9 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
SRFBP1Q8NEF9 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC13.72□□□□□ -0.21
SRFBP1Q8NEF9 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SRFBP1Q8NEF9 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SRFBP1Q8NEF9 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SRFBP1Q8NEF9 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SRFBP1Q8NEF9 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SRFBP1Q8NEF9 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SRFBP1Q8NEF9 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
SRFBP1Q8NEF9 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
SRFBP1Q8NEF9 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.71□□□□□ -0.21
SRFBP1Q8NEF9 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SRFBP1Q8NEF9 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
SRFBP1Q8NEF9 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
SRFBP1Q8NEF9 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SRFBP1Q8NEF9 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC13.71□□□□□ -0.21
SRFBP1Q8NEF9 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SRFBP1Q8NEF9 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SRFBP1Q8NEF9 AC018629.1-201ENST00000623381 1736 ntBASIC13.71□□□□□ -0.21
SRFBP1Q8NEF9 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC13.71□□□□□ -0.21
SRFBP1Q8NEF9 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SRFBP1Q8NEF9 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SRFBP1Q8NEF9 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC13.71□□□□□ -0.21
SRFBP1Q8NEF9 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
SRFBP1Q8NEF9 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SRFBP1Q8NEF9 ACTBP11-201ENST00000436287 1126 ntBASIC13.71□□□□□ -0.21
SRFBP1Q8NEF9 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC13.71□□□□□ -0.21
SRFBP1Q8NEF9 AC104306.2-201ENST00000451877 341 ntBASIC13.71□□□□□ -0.21
SRFBP1Q8NEF9 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC13.71□□□□□ -0.21
SRFBP1Q8NEF9 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SRFBP1Q8NEF9 AC013355.1-201ENST00000562625 723 ntBASIC13.71□□□□□ -0.21
SRFBP1Q8NEF9 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SRFBP1Q8NEF9 SNORD3B-2-202ENST00000571722 791 ntBASIC13.71□□□□□ -0.21
SRFBP1Q8NEF9 RN7SL219P-201ENST00000582872 296 ntBASIC13.71□□□□□ -0.21
SRFBP1Q8NEF9 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC13.71□□□□□ -0.21
SRFBP1Q8NEF9 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC13.71□□□□□ -0.21
SRFBP1Q8NEF9 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SRFBP1Q8NEF9 AL022328.3-201ENST00000607943 679 ntBASIC13.71□□□□□ -0.21
SRFBP1Q8NEF9 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SRFBP1Q8NEF9 ABBA01031663.1-201ENST00000635630 790 ntBASIC13.71□□□□□ -0.21
SRFBP1Q8NEF9 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.21
SRFBP1Q8NEF9 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SRFBP1Q8NEF9 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SRFBP1Q8NEF9 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SRFBP1Q8NEF9 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SRFBP1Q8NEF9 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SRFBP1Q8NEF9 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SRFBP1Q8NEF9 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
SRFBP1Q8NEF9 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
SRFBP1Q8NEF9 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
SRFBP1Q8NEF9 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC13.71□□□□□ -0.22
SRFBP1Q8NEF9 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SRFBP1Q8NEF9 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
SRFBP1Q8NEF9 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SRFBP1Q8NEF9 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SRFBP1Q8NEF9 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.71□□□□□ -0.22
SRFBP1Q8NEF9 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SRFBP1Q8NEF9 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SRFBP1Q8NEF9 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
SRFBP1Q8NEF9 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SRFBP1Q8NEF9 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.22
SRFBP1Q8NEF9 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.7□□□□□ -0.22
SRFBP1Q8NEF9 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.7□□□□□ -0.22
SRFBP1Q8NEF9 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.7□□□□□ -0.22
SRFBP1Q8NEF9 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SRFBP1Q8NEF9 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SRFBP1Q8NEF9 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SRFBP1Q8NEF9 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SRFBP1Q8NEF9 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SRFBP1Q8NEF9 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC13.7□□□□□ -0.22
SRFBP1Q8NEF9 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SRFBP1Q8NEF9 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SRFBP1Q8NEF9 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
SRFBP1Q8NEF9 AL590824.1-201ENST00000403828 1349 ntBASIC13.7□□□□□ -0.22
SRFBP1Q8NEF9 GRN-222ENST00000639447 1314 ntTSL 2 BASIC13.7□□□□□ -0.22
SRFBP1Q8NEF9 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.7□□□□□ -0.22
SRFBP1Q8NEF9 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SRFBP1Q8NEF9 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SRFBP1Q8NEF9 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SRFBP1Q8NEF9 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
SRFBP1Q8NEF9 CCT8L1P-201ENST00000465400 1674 ntBASIC13.7□□□□□ -0.22
SRFBP1Q8NEF9 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SRFBP1Q8NEF9 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SRFBP1Q8NEF9 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC13.7□□□□□ -0.22
SRFBP1Q8NEF9 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
SRFBP1Q8NEF9 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SRFBP1Q8NEF9 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC13.7□□□□□ -0.22
SRFBP1Q8NEF9 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SRFBP1Q8NEF9 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SRFBP1Q8NEF9 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
SRFBP1Q8NEF9 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC13.7□□□□□ -0.22
SRFBP1Q8NEF9 MIR1908-201ENST00000410394 80 ntBASIC13.7□□□□□ -0.22
SRFBP1Q8NEF9 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.7□□□□□ -0.22
SRFBP1Q8NEF9 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms