Protein–RNA interactions for Protein: Q8IX21

SLF2, SMC5-SMC6 complex localization factor protein 2, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2Q8IX21 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLF2Q8IX21 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SLF2Q8IX21 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC16.98■□□□□ 0.31
SLF2Q8IX21 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
SLF2Q8IX21 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SLF2Q8IX21 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLF2Q8IX21 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLF2Q8IX21 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SLF2Q8IX21 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLF2Q8IX21 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SLF2Q8IX21 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLF2Q8IX21 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
SLF2Q8IX21 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC16.97■□□□□ 0.31
SLF2Q8IX21 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLF2Q8IX21 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLF2Q8IX21 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLF2Q8IX21 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLF2Q8IX21 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.97■□□□□ 0.31
SLF2Q8IX21 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLF2Q8IX21 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLF2Q8IX21 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLF2Q8IX21 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
SLF2Q8IX21 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLF2Q8IX21 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.97■□□□□ 0.31
SLF2Q8IX21 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC16.97■□□□□ 0.31
SLF2Q8IX21 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLF2Q8IX21 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLF2Q8IX21 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLF2Q8IX21 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLF2Q8IX21 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
SLF2Q8IX21 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SLF2Q8IX21 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLF2Q8IX21 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
SLF2Q8IX21 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC16.97■□□□□ 0.31
SLF2Q8IX21 RN7SL564P-201ENST00000496309 250 ntBASIC16.97■□□□□ 0.31
SLF2Q8IX21 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC16.97■□□□□ 0.31
SLF2Q8IX21 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLF2Q8IX21 KRT8P2-201ENST00000556193 944 ntBASIC16.97■□□□□ 0.31
SLF2Q8IX21 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC16.97■□□□□ 0.31
SLF2Q8IX21 AC132825.4-202ENST00000578792 434 ntBASIC16.97■□□□□ 0.31
SLF2Q8IX21 MIR4265-201ENST00000582152 99 ntBASIC16.97■□□□□ 0.31
SLF2Q8IX21 AC138466.5-201ENST00000624002 808 ntBASIC16.97■□□□□ 0.31
SLF2Q8IX21 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLF2Q8IX21 DBET-201ENST00000630918 3363 ntBASIC16.97■□□□□ 0.31
SLF2Q8IX21 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLF2Q8IX21 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLF2Q8IX21 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SLF2Q8IX21 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLF2Q8IX21 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLF2Q8IX21 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
SLF2Q8IX21 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLF2Q8IX21 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
SLF2Q8IX21 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SLF2Q8IX21 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLF2Q8IX21 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SLF2Q8IX21 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLF2Q8IX21 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLF2Q8IX21 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLF2Q8IX21 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
SLF2Q8IX21 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.97■□□□□ 0.31
SLF2Q8IX21 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SLF2Q8IX21 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLF2Q8IX21 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLF2Q8IX21 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
SLF2Q8IX21 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC16.96■□□□□ 0.31
SLF2Q8IX21 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SLF2Q8IX21 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
SLF2Q8IX21 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLF2Q8IX21 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.96■□□□□ 0.31
SLF2Q8IX21 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLF2Q8IX21 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
SLF2Q8IX21 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
SLF2Q8IX21 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC16.96■□□□□ 0.31
SLF2Q8IX21 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC16.96■□□□□ 0.31
SLF2Q8IX21 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SLF2Q8IX21 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC16.96■□□□□ 0.31
SLF2Q8IX21 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC16.96■□□□□ 0.31
SLF2Q8IX21 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC16.96■□□□□ 0.31
SLF2Q8IX21 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC16.96■□□□□ 0.31
SLF2Q8IX21 RPL35P9-201ENST00000446059 350 ntBASIC16.96■□□□□ 0.31
SLF2Q8IX21 RN7SL23P-201ENST00000484055 275 ntBASIC16.96■□□□□ 0.31
SLF2Q8IX21 RNA5SP406-201ENST00000516106 112 ntBASIC16.96■□□□□ 0.31
SLF2Q8IX21 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC16.96■□□□□ 0.31
SLF2Q8IX21 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC16.96■□□□□ 0.31
SLF2Q8IX21 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC16.96■□□□□ 0.31
SLF2Q8IX21 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC16.96■□□□□ 0.31
SLF2Q8IX21 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC16.96■□□□□ 0.31
SLF2Q8IX21 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC16.96■□□□□ 0.31
SLF2Q8IX21 AC092068.1-201ENST00000592525 454 ntTSL 2 BASIC16.96■□□□□ 0.31
SLF2Q8IX21 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SLF2Q8IX21 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC16.96■□□□□ 0.31
SLF2Q8IX21 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SLF2Q8IX21 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLF2Q8IX21 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLF2Q8IX21 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLF2Q8IX21 ADK-205ENST00000539909 1866 ntTSL 2 BASIC16.96■□□□□ 0.31
SLF2Q8IX21 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLF2Q8IX21 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLF2Q8IX21 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SLF2Q8IX21 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms