Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00346Q8IVM7 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00346Q8IVM7 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
LINC00346Q8IVM7 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC12.73□□□□□ -0.37
LINC00346Q8IVM7 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
LINC00346Q8IVM7 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00346Q8IVM7 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
LINC00346Q8IVM7 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00346Q8IVM7 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00346Q8IVM7 TISP43-201ENST00000409793 538 ntTSL 4 BASIC12.73□□□□□ -0.37
LINC00346Q8IVM7 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC12.73□□□□□ -0.37
LINC00346Q8IVM7 AL157407.1-201ENST00000435784 904 ntBASIC12.73□□□□□ -0.37
LINC00346Q8IVM7 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC12.73□□□□□ -0.37
LINC00346Q8IVM7 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
LINC00346Q8IVM7 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC12.73□□□□□ -0.37
LINC00346Q8IVM7 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC12.73□□□□□ -0.37
LINC00346Q8IVM7 CR383656.12-201ENST00000549567 513 ntBASIC12.73□□□□□ -0.37
LINC00346Q8IVM7 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
LINC00346Q8IVM7 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC12.73□□□□□ -0.37
LINC00346Q8IVM7 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC12.73□□□□□ -0.37
LINC00346Q8IVM7 AL512343.1-201ENST00000605837 169 ntBASIC12.73□□□□□ -0.37
LINC00346Q8IVM7 LINC02084-201ENST00000606069 1096 ntBASIC12.73□□□□□ -0.37
LINC00346Q8IVM7 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
LINC00346Q8IVM7 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC12.73□□□□□ -0.37
LINC00346Q8IVM7 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC12.73□□□□□ -0.37
LINC00346Q8IVM7 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00346Q8IVM7 AC107918.4-201ENST00000641966 3141 ntBASIC12.73□□□□□ -0.37
LINC00346Q8IVM7 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC12.73□□□□□ -0.37
LINC00346Q8IVM7 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC12.73□□□□□ -0.37
LINC00346Q8IVM7 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
LINC00346Q8IVM7 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00346Q8IVM7 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00346Q8IVM7 AC015909.5-201ENST00000624336 2266 ntBASIC12.73□□□□□ -0.37
LINC00346Q8IVM7 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC12.73□□□□□ -0.37
LINC00346Q8IVM7 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
LINC00346Q8IVM7 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00346Q8IVM7 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC12.73□□□□□ -0.37
LINC00346Q8IVM7 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
LINC00346Q8IVM7 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.73□□□□□ -0.37
LINC00346Q8IVM7 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
LINC00346Q8IVM7 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC12.73□□□□□ -0.37
LINC00346Q8IVM7 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00346Q8IVM7 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00346Q8IVM7 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00346Q8IVM7 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
LINC00346Q8IVM7 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00346Q8IVM7 STK3-218ENST00000617590 2485 ntTSL 5 BASIC12.72□□□□□ -0.37
LINC00346Q8IVM7 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00346Q8IVM7 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00346Q8IVM7 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00346Q8IVM7 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00346Q8IVM7 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00346Q8IVM7 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
LINC00346Q8IVM7 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00346Q8IVM7 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC12.72□□□□□ -0.37
LINC00346Q8IVM7 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.72□□□□□ -0.37
LINC00346Q8IVM7 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00346Q8IVM7 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00346Q8IVM7 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00346Q8IVM7 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00346Q8IVM7 ANKRD19P-201ENST00000338192 862 ntBASIC12.72□□□□□ -0.37
LINC00346Q8IVM7 BOLA2P3-201ENST00000404566 256 ntBASIC12.72□□□□□ -0.37
LINC00346Q8IVM7 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC12.72□□□□□ -0.37
LINC00346Q8IVM7 AC005014.1-201ENST00000432006 2976 ntBASIC12.72□□□□□ -0.37
LINC00346Q8IVM7 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00346Q8IVM7 KLF2P1-201ENST00000447438 1042 ntBASIC12.72□□□□□ -0.37
LINC00346Q8IVM7 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC12.72□□□□□ -0.37
LINC00346Q8IVM7 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC12.72□□□□□ -0.37
LINC00346Q8IVM7 SNX29P1-201ENST00000548357 1007 ntBASIC12.72□□□□□ -0.37
LINC00346Q8IVM7 AC079316.1-201ENST00000548397 411 ntBASIC12.72□□□□□ -0.37
LINC00346Q8IVM7 RAB43P1-201ENST00000561790 589 ntBASIC12.72□□□□□ -0.37
LINC00346Q8IVM7 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC12.72□□□□□ -0.37
LINC00346Q8IVM7 MIR4741-201ENST00000579822 90 ntBASIC12.72□□□□□ -0.37
LINC00346Q8IVM7 MIR4783-201ENST00000580343 82 ntBASIC12.72□□□□□ -0.37
LINC00346Q8IVM7 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC12.72□□□□□ -0.37
LINC00346Q8IVM7 PCDHA5-203ENST00000614258 4248 ntBASIC12.72□□□□□ -0.37
LINC00346Q8IVM7 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00346Q8IVM7 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
LINC00346Q8IVM7 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00346Q8IVM7 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC12.72□□□□□ -0.37
LINC00346Q8IVM7 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00346Q8IVM7 APP-205ENST00000358918 2366 ntTSL 5 BASIC12.72□□□□□ -0.37
LINC00346Q8IVM7 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00346Q8IVM7 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00346Q8IVM7 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
LINC00346Q8IVM7 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00346Q8IVM7 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC12.72□□□□□ -0.37
LINC00346Q8IVM7 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00346Q8IVM7 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00346Q8IVM7 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00346Q8IVM7 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00346Q8IVM7 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.71□□□□□ -0.37
LINC00346Q8IVM7 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00346Q8IVM7 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00346Q8IVM7 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00346Q8IVM7 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
LINC00346Q8IVM7 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.71□□□□□ -0.37
LINC00346Q8IVM7 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00346Q8IVM7 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC12.71□□□□□ -0.37
LINC00346Q8IVM7 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms