Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 TP73-207ENST00000378290 1831 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC50Q8IVM0 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC15.23■□□□□ 0.03
CCDC50Q8IVM0 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC50Q8IVM0 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC50Q8IVM0 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC50Q8IVM0 FAM197Y7-201ENST00000432892 766 ntBASIC15.23■□□□□ 0.03
CCDC50Q8IVM0 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC50Q8IVM0 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.23■□□□□ 0.03
CCDC50Q8IVM0 SLC25A47P1-201ENST00000531577 414 ntBASIC15.23■□□□□ 0.03
CCDC50Q8IVM0 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.23■□□□□ 0.03
CCDC50Q8IVM0 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.23■□□□□ 0.03
CCDC50Q8IVM0 AC005586.2-201ENST00000563946 837 ntBASIC15.23■□□□□ 0.03
CCDC50Q8IVM0 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC50Q8IVM0 AC015936.2-201ENST00000593177 259 ntBASIC15.23■□□□□ 0.03
CCDC50Q8IVM0 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
CCDC50Q8IVM0 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC50Q8IVM0 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CCDC50Q8IVM0 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC50Q8IVM0 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC50Q8IVM0 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC50Q8IVM0 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CCDC50Q8IVM0 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC50Q8IVM0 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC15.23■□□□□ 0.03
CCDC50Q8IVM0 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC50Q8IVM0 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC50Q8IVM0 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC15.23■□□□□ 0.03
CCDC50Q8IVM0 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC50Q8IVM0 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC50Q8IVM0 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC50Q8IVM0 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC50Q8IVM0 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC50Q8IVM0 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC50Q8IVM0 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.23■□□□□ 0.03
CCDC50Q8IVM0 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC50Q8IVM0 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC50Q8IVM0 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CCDC50Q8IVM0 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC50Q8IVM0 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC50Q8IVM0 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC50Q8IVM0 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC50Q8IVM0 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC50Q8IVM0 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
CCDC50Q8IVM0 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC50Q8IVM0 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC50Q8IVM0 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC50Q8IVM0 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC50Q8IVM0 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC50Q8IVM0 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC50Q8IVM0 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC50Q8IVM0 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC50Q8IVM0 CD8B2-202ENST00000417670 633 ntBASIC15.22■□□□□ 0.03
CCDC50Q8IVM0 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.22■□□□□ 0.03
CCDC50Q8IVM0 AP003171.2-201ENST00000528208 925 ntBASIC15.22■□□□□ 0.03
CCDC50Q8IVM0 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC50Q8IVM0 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC50Q8IVM0 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.22■□□□□ 0.03
CCDC50Q8IVM0 AL022328.1-201ENST00000610050 478 ntBASIC15.22■□□□□ 0.03
CCDC50Q8IVM0 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.22■□□□□ 0.03
CCDC50Q8IVM0 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CCDC50Q8IVM0 AC138951.2-201ENST00000623455 1161 ntBASIC15.22■□□□□ 0.03
CCDC50Q8IVM0 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC50Q8IVM0 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC50Q8IVM0 FAM90A12P-201ENST00000519497 2375 ntBASIC15.22■□□□□ 0.03
CCDC50Q8IVM0 FAM90A24P-201ENST00000520792 2369 ntBASIC15.22■□□□□ 0.03
CCDC50Q8IVM0 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.22■□□□□ 0.03
CCDC50Q8IVM0 AC009093.10-201ENST00000641956 1442 ntBASIC15.22■□□□□ 0.03
CCDC50Q8IVM0 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC15.22■□□□□ 0.03
CCDC50Q8IVM0 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC15.22■□□□□ 0.03
CCDC50Q8IVM0 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CCDC50Q8IVM0 AC073548.1-201ENST00000624088 1882 ntBASIC15.22■□□□□ 0.03
CCDC50Q8IVM0 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC50Q8IVM0 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC50Q8IVM0 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC50Q8IVM0 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC50Q8IVM0 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC50Q8IVM0 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC15.21■□□□□ 0.03
CCDC50Q8IVM0 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CCDC50Q8IVM0 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC50Q8IVM0 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC15.21■□□□□ 0.03
CCDC50Q8IVM0 AC073869.1-201ENST00000415574 2762 ntBASIC15.21■□□□□ 0.03
CCDC50Q8IVM0 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC15.21■□□□□ 0.03
CCDC50Q8IVM0 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC50Q8IVM0 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC50Q8IVM0 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC50Q8IVM0 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC50Q8IVM0 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
CCDC50Q8IVM0 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC15.21■□□□□ 0.03
CCDC50Q8IVM0 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CCDC50Q8IVM0 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CCDC50Q8IVM0 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC50Q8IVM0 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC50Q8IVM0 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC50Q8IVM0 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.21■□□□□ 0.03
CCDC50Q8IVM0 HMGN1P19-201ENST00000436976 333 ntBASIC15.21■□□□□ 0.03
CCDC50Q8IVM0 TTTY23B-201ENST00000442790 549 ntBASIC15.21■□□□□ 0.03
CCDC50Q8IVM0 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.21■□□□□ 0.03
CCDC50Q8IVM0 FTH1P14-201ENST00000482930 551 ntBASIC15.21■□□□□ 0.03
CCDC50Q8IVM0 COX5BP1-201ENST00000507622 393 ntBASIC15.21■□□□□ 0.03
CCDC50Q8IVM0 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
CCDC50Q8IVM0 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms