Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ATG4DQ86TL0 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
ATG4DQ86TL0 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC12.99□□□□□ -0.33
ATG4DQ86TL0 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ATG4DQ86TL0 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ATG4DQ86TL0 HMGA1P1-201ENST00000415560 1062 ntBASIC12.99□□□□□ -0.33
ATG4DQ86TL0 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ATG4DQ86TL0 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC12.99□□□□□ -0.33
ATG4DQ86TL0 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC12.99□□□□□ -0.33
ATG4DQ86TL0 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC12.99□□□□□ -0.33
ATG4DQ86TL0 AC103810.3-201ENST00000583567 96 ntBASIC12.99□□□□□ -0.33
ATG4DQ86TL0 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC12.99□□□□□ -0.33
ATG4DQ86TL0 KC6-205ENST00000599934 556 ntTSL 4 BASIC12.99□□□□□ -0.33
ATG4DQ86TL0 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC12.99□□□□□ -0.33
ATG4DQ86TL0 GOLGA8IP-202ENST00000611635 2100 ntBASIC12.99□□□□□ -0.33
ATG4DQ86TL0 AL139099.5-201ENST00000635274 300 ntBASIC12.99□□□□□ -0.33
ATG4DQ86TL0 AC068587.8-201ENST00000641239 219 ntBASIC12.99□□□□□ -0.33
ATG4DQ86TL0 AC004923.1-202ENST00000642106 209 ntBASIC12.99□□□□□ -0.33
ATG4DQ86TL0 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ATG4DQ86TL0 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC12.99□□□□□ -0.33
ATG4DQ86TL0 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ATG4DQ86TL0 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ATG4DQ86TL0 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
ATG4DQ86TL0 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
ATG4DQ86TL0 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ATG4DQ86TL0 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
ATG4DQ86TL0 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
ATG4DQ86TL0 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ATG4DQ86TL0 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC12.99□□□□□ -0.33
ATG4DQ86TL0 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
ATG4DQ86TL0 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATG4DQ86TL0 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATG4DQ86TL0 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC12.98□□□□□ -0.33
ATG4DQ86TL0 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
ATG4DQ86TL0 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATG4DQ86TL0 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATG4DQ86TL0 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ATG4DQ86TL0 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.98□□□□□ -0.33
ATG4DQ86TL0 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATG4DQ86TL0 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC12.98□□□□□ -0.33
ATG4DQ86TL0 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATG4DQ86TL0 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC12.98□□□□□ -0.33
ATG4DQ86TL0 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC12.98□□□□□ -0.33
ATG4DQ86TL0 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATG4DQ86TL0 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATG4DQ86TL0 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
ATG4DQ86TL0 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ATG4DQ86TL0 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
ATG4DQ86TL0 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
ATG4DQ86TL0 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC12.98□□□□□ -0.33
ATG4DQ86TL0 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATG4DQ86TL0 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATG4DQ86TL0 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
ATG4DQ86TL0 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC12.98□□□□□ -0.33
ATG4DQ86TL0 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ATG4DQ86TL0 AC078875.1-201ENST00000431907 724 ntBASIC12.98□□□□□ -0.33
ATG4DQ86TL0 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ATG4DQ86TL0 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC12.98□□□□□ -0.33
ATG4DQ86TL0 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC12.98□□□□□ -0.33
ATG4DQ86TL0 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC12.98□□□□□ -0.33
ATG4DQ86TL0 HIST2H2BC-201ENST00000498492 580 ntBASIC12.98□□□□□ -0.33
ATG4DQ86TL0 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC12.98□□□□□ -0.33
ATG4DQ86TL0 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC12.98□□□□□ -0.33
ATG4DQ86TL0 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
ATG4DQ86TL0 NIFKP4-201ENST00000567275 1192 ntBASIC12.98□□□□□ -0.33
ATG4DQ86TL0 RN7SL163P-201ENST00000583100 276 ntBASIC12.98□□□□□ -0.33
ATG4DQ86TL0 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC12.98□□□□□ -0.33
ATG4DQ86TL0 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC12.98□□□□□ -0.33
ATG4DQ86TL0 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATG4DQ86TL0 DIO1-215ENST00000610607 796 ntTSL 5 BASIC12.98□□□□□ -0.33
ATG4DQ86TL0 AC090164.2-201ENST00000611487 516 ntBASIC12.98□□□□□ -0.33
ATG4DQ86TL0 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC12.98□□□□□ -0.33
ATG4DQ86TL0 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATG4DQ86TL0 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATG4DQ86TL0 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATG4DQ86TL0 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATG4DQ86TL0 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATG4DQ86TL0 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.98□□□□□ -0.33
ATG4DQ86TL0 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
ATG4DQ86TL0 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC12.98□□□□□ -0.33
ATG4DQ86TL0 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
ATG4DQ86TL0 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATG4DQ86TL0 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC12.98□□□□□ -0.33
ATG4DQ86TL0 POLL-206ENST00000370172 2308 ntTSL 2 BASIC12.97□□□□□ -0.33
ATG4DQ86TL0 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ATG4DQ86TL0 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATG4DQ86TL0 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATG4DQ86TL0 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
ATG4DQ86TL0 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC12.97□□□□□ -0.33
ATG4DQ86TL0 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATG4DQ86TL0 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATG4DQ86TL0 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
ATG4DQ86TL0 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC12.97□□□□□ -0.33
ATG4DQ86TL0 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC12.97□□□□□ -0.33
ATG4DQ86TL0 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
ATG4DQ86TL0 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATG4DQ86TL0 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATG4DQ86TL0 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATG4DQ86TL0 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATG4DQ86TL0 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms