Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LPCAT4Q643R3 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
LPCAT4Q643R3 IP6K3-201ENST00000293756 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LPCAT4Q643R3 LINC01024-201ENST00000499203 2769 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LPCAT4Q643R3 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
LPCAT4Q643R3 PSME3-217ENST00000622892 3183 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LPCAT4Q643R3 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.52□□□□□ -0.25
LPCAT4Q643R3 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
LPCAT4Q643R3 GPS2P2-201ENST00000430745 888 ntBASIC13.52□□□□□ -0.25
LPCAT4Q643R3 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
LPCAT4Q643R3 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.52□□□□□ -0.25
LPCAT4Q643R3 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.52□□□□□ -0.25
LPCAT4Q643R3 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.52□□□□□ -0.25
LPCAT4Q643R3 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC13.52□□□□□ -0.25
LPCAT4Q643R3 AL158212.4-201ENST00000624062 1286 ntBASIC13.52□□□□□ -0.25
LPCAT4Q643R3 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.52□□□□□ -0.25
LPCAT4Q643R3 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.52□□□□□ -0.25
LPCAT4Q643R3 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LPCAT4Q643R3 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LPCAT4Q643R3 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LPCAT4Q643R3 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
LPCAT4Q643R3 AL590440.2-201ENST00000641973 1595 ntBASIC13.52□□□□□ -0.25
LPCAT4Q643R3 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC13.52□□□□□ -0.25
LPCAT4Q643R3 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LPCAT4Q643R3 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
LPCAT4Q643R3 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC13.52□□□□□ -0.25
LPCAT4Q643R3 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
LPCAT4Q643R3 HDAC8-207ENST00000373573 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LPCAT4Q643R3 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC13.52□□□□□ -0.25
LPCAT4Q643R3 TROVE2-206ENST00000400968 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
LPCAT4Q643R3 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC13.52□□□□□ -0.25
LPCAT4Q643R3 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LPCAT4Q643R3 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
LPCAT4Q643R3 ABCC4-206ENST00000536256 2840 ntTSL 2 BASIC13.52□□□□□ -0.25
LPCAT4Q643R3 COL8A1-202ENST00000273342 3029 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
LPCAT4Q643R3 FERMT2-202ENST00000343279 3247 ntTSL 5 BASIC13.52□□□□□ -0.25
LPCAT4Q643R3 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
LPCAT4Q643R3 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
LPCAT4Q643R3 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
LPCAT4Q643R3 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
LPCAT4Q643R3 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LPCAT4Q643R3 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LPCAT4Q643R3 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LPCAT4Q643R3 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
LPCAT4Q643R3 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
LPCAT4Q643R3 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC13.51□□□□□ -0.25
LPCAT4Q643R3 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC13.51□□□□□ -0.25
LPCAT4Q643R3 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LPCAT4Q643R3 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LPCAT4Q643R3 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LPCAT4Q643R3 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LPCAT4Q643R3 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.51□□□□□ -0.25
LPCAT4Q643R3 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC13.51□□□□□ -0.25
LPCAT4Q643R3 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LPCAT4Q643R3 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC13.51□□□□□ -0.25
LPCAT4Q643R3 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LPCAT4Q643R3 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LPCAT4Q643R3 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LPCAT4Q643R3 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LPCAT4Q643R3 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LPCAT4Q643R3 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
LPCAT4Q643R3 NUS1P3-201ENST00000423502 862 ntBASIC13.51□□□□□ -0.25
LPCAT4Q643R3 FDX1P1-201ENST00000449115 551 ntBASIC13.51□□□□□ -0.25
LPCAT4Q643R3 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LPCAT4Q643R3 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LPCAT4Q643R3 ALG1L5P-201ENST00000482043 771 ntBASIC13.51□□□□□ -0.25
LPCAT4Q643R3 NMU-202ENST00000505262 693 ntTSL 3 BASIC13.51□□□□□ -0.25
LPCAT4Q643R3 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.51□□□□□ -0.25
LPCAT4Q643R3 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC13.51□□□□□ -0.25
LPCAT4Q643R3 AC010336.2-201ENST00000564226 506 ntBASIC13.51□□□□□ -0.25
LPCAT4Q643R3 AC051619.7-201ENST00000568314 623 ntBASIC13.51□□□□□ -0.25
LPCAT4Q643R3 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC13.51□□□□□ -0.25
LPCAT4Q643R3 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LPCAT4Q643R3 CCDC97-201ENST00000269967 3322 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LPCAT4Q643R3 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LPCAT4Q643R3 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LPCAT4Q643R3 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC13.51□□□□□ -0.25
LPCAT4Q643R3 SRP72-205ENST00000510663 2473 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LPCAT4Q643R3 AC026992.2-203ENST00000563004 2419 ntBASIC13.51□□□□□ -0.25
LPCAT4Q643R3 LAS1L-201ENST00000374804 2261 ntTSL 2 BASIC13.51□□□□□ -0.25
LPCAT4Q643R3 AC018445.4-201ENST00000624066 2291 ntBASIC13.51□□□□□ -0.25
LPCAT4Q643R3 CELF4-218ENST00000591287 3757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LPCAT4Q643R3 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
LPCAT4Q643R3 C12orf76-205ENST00000548191 2204 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
LPCAT4Q643R3 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC13.51□□□□□ -0.25
LPCAT4Q643R3 KLHL24-211ENST00000476808 2126 ntTSL 2 BASIC13.51□□□□□ -0.25
LPCAT4Q643R3 TMEM134-201ENST00000308022 3534 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
LPCAT4Q643R3 USP39-207ENST00000450066 2086 ntTSL 2 BASIC13.51□□□□□ -0.25
LPCAT4Q643R3 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LPCAT4Q643R3 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LPCAT4Q643R3 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
LPCAT4Q643R3 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.5□□□□□ -0.25
LPCAT4Q643R3 MKL1-210ENST00000614754 3917 ntTSL 5 BASIC13.5□□□□□ -0.25
LPCAT4Q643R3 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LPCAT4Q643R3 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LPCAT4Q643R3 TMEM25-208ENST00000524725 2630 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
LPCAT4Q643R3 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
LPCAT4Q643R3 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LPCAT4Q643R3 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.5□□□□□ -0.25
LPCAT4Q643R3 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms