Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC27Q2M243 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC27Q2M243 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC27Q2M243 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC27Q2M243 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC27Q2M243 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC27Q2M243 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC27Q2M243 AC073869.2-201ENST00000417338 1026 ntBASIC18.48■□□□□ 0.55
CCDC27Q2M243 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC27Q2M243 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC18.48■□□□□ 0.55
CCDC27Q2M243 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CCDC27Q2M243 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CCDC27Q2M243 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC27Q2M243 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC27Q2M243 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC18.48■□□□□ 0.55
CCDC27Q2M243 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC18.48■□□□□ 0.55
CCDC27Q2M243 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CCDC27Q2M243 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC18.48■□□□□ 0.55
CCDC27Q2M243 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC27Q2M243 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC18.48■□□□□ 0.55
CCDC27Q2M243 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC27Q2M243 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC27Q2M243 FMO6P-201ENST00000236166 1620 ntBASIC18.48■□□□□ 0.55
CCDC27Q2M243 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC27Q2M243 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC27Q2M243 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CCDC27Q2M243 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CCDC27Q2M243 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC27Q2M243 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC27Q2M243 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC27Q2M243 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CCDC27Q2M243 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC27Q2M243 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC27Q2M243 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC27Q2M243 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC27Q2M243 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC27Q2M243 KRT18P9-201ENST00000604826 1300 ntBASIC18.48■□□□□ 0.55
CCDC27Q2M243 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC27Q2M243 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CCDC27Q2M243 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC27Q2M243 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC27Q2M243 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC27Q2M243 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC27Q2M243 FAM90A12P-201ENST00000519497 2375 ntBASIC18.47■□□□□ 0.55
CCDC27Q2M243 FAM90A24P-201ENST00000520792 2369 ntBASIC18.47■□□□□ 0.55
CCDC27Q2M243 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC27Q2M243 FAM90A2P-201ENST00000511144 1395 ntBASIC18.47■□□□□ 0.55
CCDC27Q2M243 FAM90A25P-201ENST00000528404 1395 ntBASIC18.47■□□□□ 0.55
CCDC27Q2M243 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC27Q2M243 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC27Q2M243 OR2K2-202ENST00000374428 1038 ntBASIC18.47■□□□□ 0.55
CCDC27Q2M243 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC27Q2M243 SNORA50C-201ENST00000408535 133 ntBASIC18.47■□□□□ 0.55
CCDC27Q2M243 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC27Q2M243 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC18.47■□□□□ 0.55
CCDC27Q2M243 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC18.47■□□□□ 0.55
CCDC27Q2M243 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC27Q2M243 SLC25A15P3-201ENST00000505530 290 ntBASIC18.47■□□□□ 0.55
CCDC27Q2M243 AC008723.1-201ENST00000506922 207 ntBASIC18.47■□□□□ 0.55
CCDC27Q2M243 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CCDC27Q2M243 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC27Q2M243 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC27Q2M243 MIR3677-201ENST00000578964 60 ntBASIC18.47■□□□□ 0.55
CCDC27Q2M243 AC091812.3-201ENST00000621362 345 ntBASIC18.47■□□□□ 0.55
CCDC27Q2M243 SNORA50.1-201ENST00000628590 135 ntBASIC18.47■□□□□ 0.55
CCDC27Q2M243 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CCDC27Q2M243 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CCDC27Q2M243 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC18.47■□□□□ 0.55
CCDC27Q2M243 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC27Q2M243 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC27Q2M243 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC27Q2M243 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CCDC27Q2M243 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC27Q2M243 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC27Q2M243 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CCDC27Q2M243 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CCDC27Q2M243 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC27Q2M243 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC18.47■□□□□ 0.55
CCDC27Q2M243 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC27Q2M243 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CCDC27Q2M243 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC27Q2M243 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC27Q2M243 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC27Q2M243 AC025183.3-201ENST00000623526 1482 ntBASIC18.46■□□□□ 0.55
CCDC27Q2M243 NCLP1-201ENST00000445357 1963 ntBASIC18.46■□□□□ 0.55
CCDC27Q2M243 AC005840.4-201ENST00000541242 2494 ntBASIC18.46■□□□□ 0.55
CCDC27Q2M243 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC27Q2M243 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
CCDC27Q2M243 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CCDC27Q2M243 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
CCDC27Q2M243 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CCDC27Q2M243 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC27Q2M243 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC27Q2M243 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CCDC27Q2M243 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC27Q2M243 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC18.46■□□□□ 0.55
CCDC27Q2M243 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC27Q2M243 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC18.46■□□□□ 0.55
CCDC27Q2M243 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC18.46■□□□□ 0.55
CCDC27Q2M243 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms