Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.73□□□□□ -0.21
RSPO4Q2I0M5 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.73□□□□□ -0.21
RSPO4Q2I0M5 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO4Q2I0M5 XAGE2-201ENST00000286049 618 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO4Q2I0M5 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO4Q2I0M5 LINC00265-2P-201ENST00000413372 782 ntBASIC13.73□□□□□ -0.21
RSPO4Q2I0M5 AL359092.2-201ENST00000423330 585 ntBASIC13.73□□□□□ -0.21
RSPO4Q2I0M5 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.73□□□□□ -0.21
RSPO4Q2I0M5 GOLGA2P8-201ENST00000505201 779 ntBASIC13.73□□□□□ -0.21
RSPO4Q2I0M5 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC13.73□□□□□ -0.21
RSPO4Q2I0M5 SULT1A3-206ENST00000563322 906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO4Q2I0M5 SULT1A4-204ENST00000565290 906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO4Q2I0M5 NAT9-204ENST00000578822 839 ntTSL 3 BASIC13.73□□□□□ -0.21
RSPO4Q2I0M5 AC011483.3-201ENST00000601506 826 ntTSL 3 BASIC13.73□□□□□ -0.21
RSPO4Q2I0M5 AC148476.1-201ENST00000622182 705 ntBASIC13.73□□□□□ -0.21
RSPO4Q2I0M5 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC13.73□□□□□ -0.21
RSPO4Q2I0M5 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC13.73□□□□□ -0.21
RSPO4Q2I0M5 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
RSPO4Q2I0M5 GNG4-201ENST00000366597 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO4Q2I0M5 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.73□□□□□ -0.21
RSPO4Q2I0M5 AL590440.2-201ENST00000641973 1595 ntBASIC13.73□□□□□ -0.21
RSPO4Q2I0M5 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
RSPO4Q2I0M5 AC087481.3-201ENST00000602886 1894 ntBASIC13.73□□□□□ -0.21
RSPO4Q2I0M5 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO4Q2I0M5 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO4Q2I0M5 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO4Q2I0M5 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.73□□□□□ -0.21
RSPO4Q2I0M5 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO4Q2I0M5 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO4Q2I0M5 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
RSPO4Q2I0M5 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.73□□□□□ -0.21
RSPO4Q2I0M5 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO4Q2I0M5 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.73□□□□□ -0.21
RSPO4Q2I0M5 FAM226B-201ENST00000602508 1490 ntBASIC13.73□□□□□ -0.21
RSPO4Q2I0M5 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO4Q2I0M5 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO4Q2I0M5 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13.72□□□□□ -0.21
RSPO4Q2I0M5 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RSPO4Q2I0M5 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RSPO4Q2I0M5 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RSPO4Q2I0M5 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RSPO4Q2I0M5 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RSPO4Q2I0M5 CLUAP1-201ENST00000341633 1643 ntTSL 5 BASIC13.72□□□□□ -0.21
RSPO4Q2I0M5 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
RSPO4Q2I0M5 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC13.72□□□□□ -0.21
RSPO4Q2I0M5 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
RSPO4Q2I0M5 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.72□□□□□ -0.21
RSPO4Q2I0M5 OR6S1-201ENST00000320704 996 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
RSPO4Q2I0M5 SAA1-202ENST00000405158 675 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
RSPO4Q2I0M5 RN7SKP212-201ENST00000410851 328 ntBASIC13.72□□□□□ -0.21
RSPO4Q2I0M5 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC13.72□□□□□ -0.21
RSPO4Q2I0M5 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RSPO4Q2I0M5 AC099328.1-201ENST00000498809 1030 ntBASIC13.72□□□□□ -0.21
RSPO4Q2I0M5 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC13.72□□□□□ -0.21
RSPO4Q2I0M5 PTPN20-229ENST00000513756 640 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RSPO4Q2I0M5 AC009446.1-201ENST00000519840 808 ntTSL 2 BASIC13.72□□□□□ -0.21
RSPO4Q2I0M5 MIR4265-201ENST00000582152 99 ntBASIC13.72□□□□□ -0.21
RSPO4Q2I0M5 AC087072.1-201ENST00000603727 421 ntBASIC13.72□□□□□ -0.21
RSPO4Q2I0M5 LINC01012-203ENST00000628762 743 ntTSL 5 BASIC13.72□□□□□ -0.21
RSPO4Q2I0M5 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
RSPO4Q2I0M5 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RSPO4Q2I0M5 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.72□□□□□ -0.21
RSPO4Q2I0M5 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
RSPO4Q2I0M5 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
RSPO4Q2I0M5 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
RSPO4Q2I0M5 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
RSPO4Q2I0M5 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RSPO4Q2I0M5 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RSPO4Q2I0M5 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RSPO4Q2I0M5 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RSPO4Q2I0M5 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.72□□□□□ -0.21
RSPO4Q2I0M5 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.72□□□□□ -0.21
RSPO4Q2I0M5 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
RSPO4Q2I0M5 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.72□□□□□ -0.21
RSPO4Q2I0M5 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.71□□□□□ -0.21
RSPO4Q2I0M5 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RSPO4Q2I0M5 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.71□□□□□ -0.21
RSPO4Q2I0M5 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.71□□□□□ -0.21
RSPO4Q2I0M5 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RSPO4Q2I0M5 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.71□□□□□ -0.21
RSPO4Q2I0M5 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RSPO4Q2I0M5 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RSPO4Q2I0M5 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RSPO4Q2I0M5 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RSPO4Q2I0M5 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RSPO4Q2I0M5 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RSPO4Q2I0M5 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RSPO4Q2I0M5 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RSPO4Q2I0M5 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RSPO4Q2I0M5 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RSPO4Q2I0M5 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RSPO4Q2I0M5 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RSPO4Q2I0M5 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
RSPO4Q2I0M5 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RSPO4Q2I0M5 RHOC-205ENST00000369636 786 ntTSL 2 BASIC13.71□□□□□ -0.21
RSPO4Q2I0M5 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
RSPO4Q2I0M5 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC13.71□□□□□ -0.21
RSPO4Q2I0M5 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
RSPO4Q2I0M5 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC13.71□□□□□ -0.21
RSPO4Q2I0M5 HNRNPA3P6-201ENST00000472163 1006 ntBASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms