Protein–RNA interactions for Protein: Q0D2K0

NIPAL4, Magnesium transporter NIPA4, humanhuman

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL4Q0D2K0 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC14.55□□□□□ -0.08
NIPAL4Q0D2K0 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NIPAL4Q0D2K0 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC14.55□□□□□ -0.08
NIPAL4Q0D2K0 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC14.55□□□□□ -0.08
NIPAL4Q0D2K0 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC14.55□□□□□ -0.08
NIPAL4Q0D2K0 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NIPAL4Q0D2K0 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NIPAL4Q0D2K0 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.55□□□□□ -0.08
NIPAL4Q0D2K0 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.55□□□□□ -0.08
NIPAL4Q0D2K0 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NIPAL4Q0D2K0 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
NIPAL4Q0D2K0 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NIPAL4Q0D2K0 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NIPAL4Q0D2K0 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NIPAL4Q0D2K0 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NIPAL4Q0D2K0 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NIPAL4Q0D2K0 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC14.55□□□□□ -0.08
NIPAL4Q0D2K0 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
NIPAL4Q0D2K0 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NIPAL4Q0D2K0 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NIPAL4Q0D2K0 AC097376.2-205ENST00000610159 5334 ntBASIC14.55□□□□□ -0.08
NIPAL4Q0D2K0 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
NIPAL4Q0D2K0 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NIPAL4Q0D2K0 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC14.55□□□□□ -0.08
NIPAL4Q0D2K0 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.55□□□□□ -0.08
NIPAL4Q0D2K0 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
NIPAL4Q0D2K0 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NIPAL4Q0D2K0 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NIPAL4Q0D2K0 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NIPAL4Q0D2K0 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NIPAL4Q0D2K0 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NIPAL4Q0D2K0 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
NIPAL4Q0D2K0 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NIPAL4Q0D2K0 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
NIPAL4Q0D2K0 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NIPAL4Q0D2K0 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NIPAL4Q0D2K0 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NIPAL4Q0D2K0 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NIPAL4Q0D2K0 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NIPAL4Q0D2K0 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC14.54□□□□□ -0.08
NIPAL4Q0D2K0 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NIPAL4Q0D2K0 AC125604.1-201ENST00000496255 707 ntBASIC14.54□□□□□ -0.08
NIPAL4Q0D2K0 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NIPAL4Q0D2K0 AP001258.2-201ENST00000529891 490 ntBASIC14.54□□□□□ -0.08
NIPAL4Q0D2K0 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.54□□□□□ -0.08
NIPAL4Q0D2K0 AC140658.4-201ENST00000561990 352 ntBASIC14.54□□□□□ -0.08
NIPAL4Q0D2K0 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC14.54□□□□□ -0.08
NIPAL4Q0D2K0 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC14.54□□□□□ -0.08
NIPAL4Q0D2K0 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
NIPAL4Q0D2K0 AL645939.5-201ENST00000606834 243 ntBASIC14.54□□□□□ -0.08
NIPAL4Q0D2K0 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.54□□□□□ -0.08
NIPAL4Q0D2K0 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NIPAL4Q0D2K0 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC14.54□□□□□ -0.08
NIPAL4Q0D2K0 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
NIPAL4Q0D2K0 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14.54□□□□□ -0.08
NIPAL4Q0D2K0 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC14.54□□□□□ -0.08
NIPAL4Q0D2K0 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC14.54□□□□□ -0.08
NIPAL4Q0D2K0 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
NIPAL4Q0D2K0 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC14.54□□□□□ -0.08
NIPAL4Q0D2K0 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NIPAL4Q0D2K0 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
NIPAL4Q0D2K0 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NIPAL4Q0D2K0 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
NIPAL4Q0D2K0 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
NIPAL4Q0D2K0 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.54□□□□□ -0.08
NIPAL4Q0D2K0 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NIPAL4Q0D2K0 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC14.54□□□□□ -0.08
NIPAL4Q0D2K0 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NIPAL4Q0D2K0 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NIPAL4Q0D2K0 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
NIPAL4Q0D2K0 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
NIPAL4Q0D2K0 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.54□□□□□ -0.08
NIPAL4Q0D2K0 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
NIPAL4Q0D2K0 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
NIPAL4Q0D2K0 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NIPAL4Q0D2K0 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
NIPAL4Q0D2K0 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NIPAL4Q0D2K0 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NIPAL4Q0D2K0 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NIPAL4Q0D2K0 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.53□□□□□ -0.08
NIPAL4Q0D2K0 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
NIPAL4Q0D2K0 AC020658.7-201ENST00000624274 2442 ntBASIC14.53□□□□□ -0.08
NIPAL4Q0D2K0 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.53□□□□□ -0.08
NIPAL4Q0D2K0 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.53□□□□□ -0.08
NIPAL4Q0D2K0 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
NIPAL4Q0D2K0 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NIPAL4Q0D2K0 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NIPAL4Q0D2K0 AC007952.5-201ENST00000572818 1486 ntBASIC14.53□□□□□ -0.08
NIPAL4Q0D2K0 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
NIPAL4Q0D2K0 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
NIPAL4Q0D2K0 LINC00115-201ENST00000473798 1317 ntBASIC14.53□□□□□ -0.08
NIPAL4Q0D2K0 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NIPAL4Q0D2K0 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NIPAL4Q0D2K0 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NIPAL4Q0D2K0 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NIPAL4Q0D2K0 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
NIPAL4Q0D2K0 CRCP-204ENST00000398684 492 ntTSL 2 BASIC14.53□□□□□ -0.08
NIPAL4Q0D2K0 MIR1247-201ENST00000408206 136 ntBASIC14.53□□□□□ -0.08
NIPAL4Q0D2K0 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC14.53□□□□□ -0.08
NIPAL4Q0D2K0 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms