Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 AC010183.1-201ENST00000552413 559 ntTSL 4 BASIC11.99□□□□□ -0.49
RIPPLY3P57055 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
RIPPLY3P57055 CYP1B1-AS1-204ENST00000589303 579 ntTSL 5 BASIC11.99□□□□□ -0.49
RIPPLY3P57055 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
RIPPLY3P57055 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC11.99□□□□□ -0.49
RIPPLY3P57055 MIR6819-201ENST00000622122 61 ntBASIC11.99□□□□□ -0.49
RIPPLY3P57055 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
RIPPLY3P57055 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC11.99□□□□□ -0.49
RIPPLY3P57055 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
RIPPLY3P57055 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
RIPPLY3P57055 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RIPPLY3P57055 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC11.99□□□□□ -0.49
RIPPLY3P57055 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RIPPLY3P57055 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC11.99□□□□□ -0.49
RIPPLY3P57055 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RIPPLY3P57055 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RIPPLY3P57055 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RIPPLY3P57055 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC11.99□□□□□ -0.49
RIPPLY3P57055 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC11.99□□□□□ -0.49
RIPPLY3P57055 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RIPPLY3P57055 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
RIPPLY3P57055 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RIPPLY3P57055 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RIPPLY3P57055 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
RIPPLY3P57055 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RIPPLY3P57055 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC11.99□□□□□ -0.49
RIPPLY3P57055 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
RIPPLY3P57055 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
RIPPLY3P57055 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RIPPLY3P57055 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RIPPLY3P57055 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RIPPLY3P57055 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RIPPLY3P57055 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
RIPPLY3P57055 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RIPPLY3P57055 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
RIPPLY3P57055 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC11.98□□□□□ -0.49
RIPPLY3P57055 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
RIPPLY3P57055 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
RIPPLY3P57055 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
RIPPLY3P57055 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC11.98□□□□□ -0.49
RIPPLY3P57055 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC11.98□□□□□ -0.49
RIPPLY3P57055 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RIPPLY3P57055 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC11.98□□□□□ -0.49
RIPPLY3P57055 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
RIPPLY3P57055 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RIPPLY3P57055 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RIPPLY3P57055 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
RIPPLY3P57055 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RIPPLY3P57055 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC11.98□□□□□ -0.49
RIPPLY3P57055 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RIPPLY3P57055 AC093462.1-201ENST00000621167 1683 ntBASIC11.98□□□□□ -0.49
RIPPLY3P57055 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
RIPPLY3P57055 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC11.98□□□□□ -0.49
RIPPLY3P57055 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
RIPPLY3P57055 HLA-DQB1-202ENST00000399079 1501 ntBASIC11.98□□□□□ -0.49
RIPPLY3P57055 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
RIPPLY3P57055 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RIPPLY3P57055 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC11.98□□□□□ -0.49
RIPPLY3P57055 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RIPPLY3P57055 CCL24-201ENST00000222902 582 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RIPPLY3P57055 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RIPPLY3P57055 SMIM4-201ENST00000307106 274 ntTSL 2 BASIC11.98□□□□□ -0.49
RIPPLY3P57055 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RIPPLY3P57055 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RIPPLY3P57055 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC11.98□□□□□ -0.49
RIPPLY3P57055 AL773545.2-201ENST00000442149 472 ntBASIC11.98□□□□□ -0.49
RIPPLY3P57055 CSNK1G2P1-201ENST00000442675 955 ntBASIC11.98□□□□□ -0.49
RIPPLY3P57055 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC11.98□□□□□ -0.49
RIPPLY3P57055 B9D1-206ENST00000461069 923 ntTSL 2 BASIC11.98□□□□□ -0.49
RIPPLY3P57055 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RIPPLY3P57055 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
RIPPLY3P57055 CLPP-205ENST00000596605 646 ntTSL 2 BASIC11.98□□□□□ -0.49
RIPPLY3P57055 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC11.98□□□□□ -0.49
RIPPLY3P57055 AL118522.1-201ENST00000611368 560 ntBASIC11.98□□□□□ -0.49
RIPPLY3P57055 MIR7848-201ENST00000617402 101 ntBASIC11.98□□□□□ -0.49
RIPPLY3P57055 GPR39-203ENST00000622084 900 ntTSL 5 BASIC11.98□□□□□ -0.49
RIPPLY3P57055 AC002472.3-201ENST00000640124 621 ntBASIC11.98□□□□□ -0.49
RIPPLY3P57055 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RIPPLY3P57055 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC11.98□□□□□ -0.49
RIPPLY3P57055 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC11.98□□□□□ -0.49
RIPPLY3P57055 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
RIPPLY3P57055 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RIPPLY3P57055 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RIPPLY3P57055 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RIPPLY3P57055 SRC-202ENST00000373558 4304 ntTSL 5 BASIC11.98□□□□□ -0.49
RIPPLY3P57055 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC11.98□□□□□ -0.49
RIPPLY3P57055 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RIPPLY3P57055 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC11.98□□□□□ -0.49
RIPPLY3P57055 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RIPPLY3P57055 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC11.98□□□□□ -0.49
RIPPLY3P57055 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC11.98□□□□□ -0.49
RIPPLY3P57055 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
RIPPLY3P57055 TNN-203ENST00000622870 3719 ntTSL 5 BASIC11.98□□□□□ -0.49
RIPPLY3P57055 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RIPPLY3P57055 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RIPPLY3P57055 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RIPPLY3P57055 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RIPPLY3P57055 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RIPPLY3P57055 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RIPPLY3P57055 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms