Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.93□□□□□ -0.02
CDH6P55285 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC14.93□□□□□ -0.02
CDH6P55285 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDH6P55285 AL591471.1-201ENST00000621855 229 ntBASIC14.93□□□□□ -0.02
CDH6P55285 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CDH6P55285 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH6P55285 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.93□□□□□ -0.02
CDH6P55285 FAM90A12P-201ENST00000519497 2375 ntBASIC14.93□□□□□ -0.02
CDH6P55285 FAM90A24P-201ENST00000520792 2369 ntBASIC14.93□□□□□ -0.02
CDH6P55285 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
CDH6P55285 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CDH6P55285 KRT8P29-201ENST00000420409 1371 ntBASIC14.93□□□□□ -0.02
CDH6P55285 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.93□□□□□ -0.02
CDH6P55285 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH6P55285 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH6P55285 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH6P55285 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.93□□□□□ -0.02
CDH6P55285 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC14.93□□□□□ -0.02
CDH6P55285 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
CDH6P55285 AL928654.5-201ENST00000624831 2501 ntBASIC14.93□□□□□ -0.02
CDH6P55285 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH6P55285 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CDH6P55285 AC092053.3-201ENST00000641308 4975 ntBASIC14.93□□□□□ -0.02
CDH6P55285 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH6P55285 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC14.92□□□□□ -0.02
CDH6P55285 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH6P55285 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH6P55285 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH6P55285 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH6P55285 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
CDH6P55285 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC14.92□□□□□ -0.02
CDH6P55285 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDH6P55285 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDH6P55285 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC14.92□□□□□ -0.02
CDH6P55285 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDH6P55285 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH6P55285 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH6P55285 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH6P55285 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDH6P55285 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
CDH6P55285 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.92□□□□□ -0.02
CDH6P55285 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC14.92□□□□□ -0.02
CDH6P55285 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDH6P55285 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH6P55285 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.92□□□□□ -0.02
CDH6P55285 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH6P55285 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH6P55285 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH6P55285 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
CDH6P55285 MIR663B-201ENST00000408361 115 ntBASIC14.92□□□□□ -0.02
CDH6P55285 KRT18P36-201ENST00000411618 1276 ntBASIC14.92□□□□□ -0.02
CDH6P55285 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDH6P55285 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.92□□□□□ -0.02
CDH6P55285 GOLGA2P4-201ENST00000441462 777 ntBASIC14.92□□□□□ -0.02
CDH6P55285 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC14.92□□□□□ -0.02
CDH6P55285 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDH6P55285 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.92□□□□□ -0.02
CDH6P55285 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.92□□□□□ -0.02
CDH6P55285 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC14.92□□□□□ -0.02
CDH6P55285 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.92□□□□□ -0.02
CDH6P55285 CFL1-212ENST00000531413 636 ntTSL 3 BASIC14.92□□□□□ -0.02
CDH6P55285 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDH6P55285 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
CDH6P55285 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.92□□□□□ -0.02
CDH6P55285 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.92□□□□□ -0.02
CDH6P55285 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.92□□□□□ -0.02
CDH6P55285 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.92□□□□□ -0.02
CDH6P55285 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
CDH6P55285 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
CDH6P55285 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDH6P55285 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH6P55285 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.92□□□□□ -0.02
CDH6P55285 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH6P55285 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.92□□□□□ -0.02
CDH6P55285 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CDH6P55285 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH6P55285 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDH6P55285 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH6P55285 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.92□□□□□ -0.02
CDH6P55285 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDH6P55285 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC14.92□□□□□ -0.02
CDH6P55285 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.92□□□□□ -0.02
CDH6P55285 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
CDH6P55285 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH6P55285 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.91□□□□□ -0.02
CDH6P55285 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH6P55285 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.91□□□□□ -0.02
CDH6P55285 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC14.91□□□□□ -0.02
CDH6P55285 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC14.91□□□□□ -0.02
CDH6P55285 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC14.91□□□□□ -0.02
CDH6P55285 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CDH6P55285 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CDH6P55285 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CDH6P55285 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
CDH6P55285 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH6P55285 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH6P55285 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDH6P55285 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CDH6P55285 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH6P55285 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms