Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.14□□□□□ -0.15
CDKN2DP55273 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.14□□□□□ -0.15
CDKN2DP55273 AC017083.2-201ENST00000608069 979 ntBASIC14.14□□□□□ -0.15
CDKN2DP55273 MIR6805-201ENST00000615055 62 ntBASIC14.14□□□□□ -0.15
CDKN2DP55273 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14.14□□□□□ -0.15
CDKN2DP55273 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.14□□□□□ -0.15
CDKN2DP55273 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CDKN2DP55273 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDKN2DP55273 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CDKN2DP55273 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CDKN2DP55273 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.14□□□□□ -0.15
CDKN2DP55273 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CDKN2DP55273 AHCYP4-201ENST00000419201 1315 ntBASIC14.14□□□□□ -0.15
CDKN2DP55273 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDKN2DP55273 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDKN2DP55273 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDKN2DP55273 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
CDKN2DP55273 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDKN2DP55273 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CDKN2DP55273 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC14.13□□□□□ -0.15
CDKN2DP55273 AC004899.1-201ENST00000424687 1714 ntBASIC14.13□□□□□ -0.15
CDKN2DP55273 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CDKN2DP55273 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC14.13□□□□□ -0.15
CDKN2DP55273 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDKN2DP55273 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDKN2DP55273 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDKN2DP55273 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CDKN2DP55273 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDKN2DP55273 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDKN2DP55273 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDKN2DP55273 JTB-202ENST00000356648 1040 ntTSL 2 BASIC14.13□□□□□ -0.15
CDKN2DP55273 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.13□□□□□ -0.15
CDKN2DP55273 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CDKN2DP55273 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.13□□□□□ -0.15
CDKN2DP55273 MIR663B-201ENST00000408361 115 ntBASIC14.13□□□□□ -0.15
CDKN2DP55273 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC14.13□□□□□ -0.15
CDKN2DP55273 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.13□□□□□ -0.15
CDKN2DP55273 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.13□□□□□ -0.15
CDKN2DP55273 HLA-J-204ENST00000495278 958 ntBASIC14.13□□□□□ -0.15
CDKN2DP55273 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDKN2DP55273 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDKN2DP55273 MAX-218ENST00000557746 571 ntTSL 4 BASIC14.13□□□□□ -0.15
CDKN2DP55273 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC14.13□□□□□ -0.15
CDKN2DP55273 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CDKN2DP55273 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14.13□□□□□ -0.15
CDKN2DP55273 BNIP3P13-201ENST00000599968 566 ntBASIC14.13□□□□□ -0.15
CDKN2DP55273 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC14.13□□□□□ -0.15
CDKN2DP55273 AC022748.3-201ENST00000621828 275 ntBASIC14.13□□□□□ -0.15
CDKN2DP55273 PPT1-213ENST00000641319 2388 ntBASIC14.13□□□□□ -0.15
CDKN2DP55273 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDKN2DP55273 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDKN2DP55273 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CDKN2DP55273 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDKN2DP55273 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.13□□□□□ -0.15
CDKN2DP55273 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDKN2DP55273 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDKN2DP55273 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC14.13□□□□□ -0.15
CDKN2DP55273 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC14.13□□□□□ -0.15
CDKN2DP55273 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
CDKN2DP55273 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CDKN2DP55273 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC14.13□□□□□ -0.15
CDKN2DP55273 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.12□□□□□ -0.15
CDKN2DP55273 MARK2P9-201ENST00000430958 1727 ntBASIC14.12□□□□□ -0.15
CDKN2DP55273 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CDKN2DP55273 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CDKN2DP55273 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDKN2DP55273 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC14.12□□□□□ -0.15
CDKN2DP55273 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDKN2DP55273 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDKN2DP55273 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDKN2DP55273 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CDKN2DP55273 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC14.12□□□□□ -0.15
CDKN2DP55273 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
CDKN2DP55273 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDKN2DP55273 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDKN2DP55273 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDKN2DP55273 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.12□□□□□ -0.15
CDKN2DP55273 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDKN2DP55273 AC103592.1-201ENST00000394513 664 ntBASIC14.12□□□□□ -0.15
CDKN2DP55273 HMGA1P1-201ENST00000415560 1062 ntBASIC14.12□□□□□ -0.15
CDKN2DP55273 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDKN2DP55273 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.12□□□□□ -0.15
CDKN2DP55273 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.12□□□□□ -0.15
CDKN2DP55273 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.12□□□□□ -0.15
CDKN2DP55273 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.12□□□□□ -0.15
CDKN2DP55273 AP000346.4-201ENST00000614827 381 ntBASIC14.12□□□□□ -0.15
CDKN2DP55273 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC14.12□□□□□ -0.15
CDKN2DP55273 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDKN2DP55273 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDKN2DP55273 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDKN2DP55273 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC14.12□□□□□ -0.15
CDKN2DP55273 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDKN2DP55273 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC14.12□□□□□ -0.15
CDKN2DP55273 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDKN2DP55273 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CDKN2DP55273 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDKN2DP55273 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CDKN2DP55273 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC14.12□□□□□ -0.15
CDKN2DP55273 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDKN2DP55273 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms