Protein–RNA interactions for Protein: P43354

NR4A2, Nuclear receptor subfamily 4 group A member 2, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A2P43354 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.14□□□□□ -0.31
NR4A2P43354 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
NR4A2P43354 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
NR4A2P43354 SLC8A3-205ENST00000394330 2622 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NR4A2P43354 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
NR4A2P43354 AGGF1P1-201ENST00000509500 2073 ntBASIC13.14□□□□□ -0.31
NR4A2P43354 AL022323.5-201ENST00000624101 2059 ntBASIC13.14□□□□□ -0.31
NR4A2P43354 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
NR4A2P43354 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NR4A2P43354 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.14□□□□□ -0.31
NR4A2P43354 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
NR4A2P43354 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
NR4A2P43354 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NR4A2P43354 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC13.14□□□□□ -0.31
NR4A2P43354 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NR4A2P43354 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
NR4A2P43354 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC13.14□□□□□ -0.31
NR4A2P43354 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NR4A2P43354 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
NR4A2P43354 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NR4A2P43354 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NR4A2P43354 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NR4A2P43354 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
NR4A2P43354 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
NR4A2P43354 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
NR4A2P43354 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
NR4A2P43354 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NR4A2P43354 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.14□□□□□ -0.31
NR4A2P43354 AL355864.2-201ENST00000447420 863 ntBASIC13.14□□□□□ -0.31
NR4A2P43354 BCRP2-202ENST00000447763 634 ntBASIC13.14□□□□□ -0.31
NR4A2P43354 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
NR4A2P43354 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.14□□□□□ -0.31
NR4A2P43354 BCRP6-201ENST00000510112 632 ntBASIC13.14□□□□□ -0.31
NR4A2P43354 BCRP7-201ENST00000511549 544 ntBASIC13.14□□□□□ -0.31
NR4A2P43354 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.14□□□□□ -0.31
NR4A2P43354 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.14□□□□□ -0.31
NR4A2P43354 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.14□□□□□ -0.31
NR4A2P43354 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.14□□□□□ -0.31
NR4A2P43354 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.14□□□□□ -0.31
NR4A2P43354 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.14□□□□□ -0.31
NR4A2P43354 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NR4A2P43354 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.14□□□□□ -0.31
NR4A2P43354 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
NR4A2P43354 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NR4A2P43354 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC13.14□□□□□ -0.31
NR4A2P43354 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
NR4A2P43354 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.14□□□□□ -0.31
NR4A2P43354 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC13.14□□□□□ -0.31
NR4A2P43354 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
NR4A2P43354 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.14□□□□□ -0.31
NR4A2P43354 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NR4A2P43354 SUPT20HL1-201ENST00000436466 2618 ntBASIC13.14□□□□□ -0.31
NR4A2P43354 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
NR4A2P43354 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NR4A2P43354 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.14□□□□□ -0.31
NR4A2P43354 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
NR4A2P43354 NPTN-IT1-201ENST00000628401 2283 ntBASIC13.14□□□□□ -0.31
NR4A2P43354 LPO-204ENST00000543544 2350 ntTSL 2 BASIC13.14□□□□□ -0.31
NR4A2P43354 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NR4A2P43354 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC13.14□□□□□ -0.31
NR4A2P43354 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NR4A2P43354 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NR4A2P43354 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NR4A2P43354 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
NR4A2P43354 REXO1L6P-201ENST00000603433 1515 ntBASIC13.13□□□□□ -0.31
NR4A2P43354 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NR4A2P43354 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
NR4A2P43354 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
NR4A2P43354 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.13□□□□□ -0.31
NR4A2P43354 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.13□□□□□ -0.31
NR4A2P43354 AC134407.3-201ENST00000624035 2139 ntBASIC13.13□□□□□ -0.31
NR4A2P43354 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NR4A2P43354 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC13.13□□□□□ -0.31
NR4A2P43354 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
NR4A2P43354 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
NR4A2P43354 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NR4A2P43354 AC022400.8-201ENST00000623453 3599 ntBASIC13.13□□□□□ -0.31
NR4A2P43354 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NR4A2P43354 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NR4A2P43354 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NR4A2P43354 AC111170.3-201ENST00000624282 2464 ntBASIC13.13□□□□□ -0.31
NR4A2P43354 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
NR4A2P43354 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
NR4A2P43354 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NR4A2P43354 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
NR4A2P43354 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
NR4A2P43354 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.13□□□□□ -0.31
NR4A2P43354 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NR4A2P43354 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.13□□□□□ -0.31
NR4A2P43354 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.13□□□□□ -0.31
NR4A2P43354 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.13□□□□□ -0.31
NR4A2P43354 VDAC1P7-201ENST00000462417 847 ntBASIC13.13□□□□□ -0.31
NR4A2P43354 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.13□□□□□ -0.31
NR4A2P43354 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NR4A2P43354 AC015910.1-201ENST00000579400 975 ntBASIC13.13□□□□□ -0.31
NR4A2P43354 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.13□□□□□ -0.31
NR4A2P43354 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.13□□□□□ -0.31
NR4A2P43354 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NR4A2P43354 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
NR4A2P43354 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms