Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
HMGCLP35914 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
HMGCLP35914 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HMGCLP35914 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
HMGCLP35914 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
HMGCLP35914 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
HMGCLP35914 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC14.21□□□□□ -0.13
HMGCLP35914 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMGCLP35914 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HMGCLP35914 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMGCLP35914 AGAP10P-201ENST00000454844 2418 ntBASIC14.21□□□□□ -0.13
HMGCLP35914 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
HMGCLP35914 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HMGCLP35914 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HMGCLP35914 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMGCLP35914 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HMGCLP35914 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
HMGCLP35914 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HMGCLP35914 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMGCLP35914 CMC1-204ENST00000423894 549 ntTSL 2 BASIC14.21□□□□□ -0.13
HMGCLP35914 AC005077.2-201ENST00000449786 690 ntBASIC14.21□□□□□ -0.13
HMGCLP35914 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC14.21□□□□□ -0.13
HMGCLP35914 RN7SL11P-201ENST00000471305 293 ntBASIC14.21□□□□□ -0.13
HMGCLP35914 CHCHD2P2-201ENST00000503744 321 ntBASIC14.21□□□□□ -0.13
HMGCLP35914 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HMGCLP35914 AC116345.2-201ENST00000512837 523 ntBASIC14.21□□□□□ -0.13
HMGCLP35914 ADM-202ENST00000524948 584 ntTSL 2 BASIC14.21□□□□□ -0.13
HMGCLP35914 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC14.21□□□□□ -0.13
HMGCLP35914 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
HMGCLP35914 ACTG1P17-201ENST00000558391 1119 ntBASIC14.21□□□□□ -0.13
HMGCLP35914 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC14.21□□□□□ -0.13
HMGCLP35914 AL928654.5-201ENST00000624831 2501 ntBASIC14.21□□□□□ -0.13
HMGCLP35914 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC14.21□□□□□ -0.13
HMGCLP35914 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HMGCLP35914 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.21□□□□□ -0.13
HMGCLP35914 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
HMGCLP35914 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HMGCLP35914 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMGCLP35914 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HMGCLP35914 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMGCLP35914 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMGCLP35914 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.21□□□□□ -0.13
HMGCLP35914 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMGCLP35914 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HMGCLP35914 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
HMGCLP35914 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
HMGCLP35914 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
HMGCLP35914 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HMGCLP35914 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.14
HMGCLP35914 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HMGCLP35914 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
HMGCLP35914 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
HMGCLP35914 AC008132.1-202ENST00000342005 1389 ntBASIC14.21□□□□□ -0.14
HMGCLP35914 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
HMGCLP35914 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
HMGCLP35914 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMGCLP35914 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
HMGCLP35914 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMGCLP35914 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.2□□□□□ -0.14
HMGCLP35914 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMGCLP35914 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HMGCLP35914 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMGCLP35914 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HMGCLP35914 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.2□□□□□ -0.14
HMGCLP35914 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMGCLP35914 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMGCLP35914 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMGCLP35914 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
HMGCLP35914 MBP-201ENST00000354542 575 ntTSL 2 BASIC14.2□□□□□ -0.14
HMGCLP35914 BAX-205ENST00000391871 687 ntTSL 5 BASIC14.2□□□□□ -0.14
HMGCLP35914 ELK2AP-201ENST00000392510 1007 ntBASIC14.2□□□□□ -0.14
HMGCLP35914 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HMGCLP35914 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMGCLP35914 AK2P2-201ENST00000439142 405 ntBASIC14.2□□□□□ -0.14
HMGCLP35914 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC14.2□□□□□ -0.14
HMGCLP35914 PFN2-206ENST00000461930 606 ntTSL 4 BASIC14.2□□□□□ -0.14
HMGCLP35914 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC14.2□□□□□ -0.14
HMGCLP35914 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC14.2□□□□□ -0.14
HMGCLP35914 AC024681.1-201ENST00000521917 487 ntBASIC14.2□□□□□ -0.14
HMGCLP35914 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC14.2□□□□□ -0.14
HMGCLP35914 MIR6769A-201ENST00000617340 73 ntBASIC14.2□□□□□ -0.14
HMGCLP35914 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HMGCLP35914 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMGCLP35914 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HMGCLP35914 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMGCLP35914 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HMGCLP35914 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HMGCLP35914 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMGCLP35914 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMGCLP35914 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMGCLP35914 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC14.2□□□□□ -0.14
HMGCLP35914 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMGCLP35914 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HMGCLP35914 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
HMGCLP35914 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.2□□□□□ -0.14
HMGCLP35914 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCLP35914 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCLP35914 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCLP35914 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
HMGCLP35914 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms