Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC11.05□□□□□ -0.64
RAB4AP20338 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RAB4AP20338 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC11.05□□□□□ -0.64
RAB4AP20338 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
RAB4AP20338 INO80E-210ENST00000567705 880 ntTSL 3 BASIC11.05□□□□□ -0.64
RAB4AP20338 AP000842.3-202ENST00000569238 1080 ntBASIC11.05□□□□□ -0.64
RAB4AP20338 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC11.05□□□□□ -0.64
RAB4AP20338 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC11.05□□□□□ -0.64
RAB4AP20338 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
RAB4AP20338 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC11.05□□□□□ -0.64
RAB4AP20338 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC11.05□□□□□ -0.64
RAB4AP20338 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC11.05□□□□□ -0.64
RAB4AP20338 AC025181.2-201ENST00000606994 802 ntBASIC11.05□□□□□ -0.64
RAB4AP20338 MIR7706-201ENST00000613747 67 ntBASIC11.05□□□□□ -0.64
RAB4AP20338 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
RAB4AP20338 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC11.05□□□□□ -0.64
RAB4AP20338 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RAB4AP20338 ST5-201ENST00000313726 4507 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
RAB4AP20338 MARCH8-204ENST00000453424 5638 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
RAB4AP20338 ARHGEF10-204ENST00000398564 5480 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
RAB4AP20338 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RAB4AP20338 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
RAB4AP20338 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
RAB4AP20338 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RAB4AP20338 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
RAB4AP20338 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
RAB4AP20338 AC020910.6-201ENST00000623084 1459 ntBASIC11.05□□□□□ -0.64
RAB4AP20338 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
RAB4AP20338 GAS7-219ENST00000585266 3535 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
RAB4AP20338 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
RAB4AP20338 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
RAB4AP20338 ALDH1L1-205ENST00000452905 2758 ntTSL 2 BASIC11.05□□□□□ -0.64
RAB4AP20338 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
RAB4AP20338 PDP1-202ENST00000396200 4358 ntAPPRIS ALT1 TSL 4 BASIC11.05□□□□□ -0.64
RAB4AP20338 CADM3-AS1-201ENST00000415675 5044 ntTSL 2 BASIC11.04□□□□□ -0.64
RAB4AP20338 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC11.04□□□□□ -0.64
RAB4AP20338 NFASC-206ENST00000404076 5728 ntTSL 5 BASIC11.04□□□□□ -0.64
RAB4AP20338 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RAB4AP20338 MDH2-204ENST00000443006 2020 ntTSL 2 BASIC11.04□□□□□ -0.64
RAB4AP20338 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RAB4AP20338 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC11.04□□□□□ -0.64
RAB4AP20338 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
RAB4AP20338 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
RAB4AP20338 CHFR-201ENST00000266880 11133 ntTSL 2 BASIC11.04□□□□□ -0.64
RAB4AP20338 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
RAB4AP20338 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
RAB4AP20338 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RAB4AP20338 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RAB4AP20338 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
RAB4AP20338 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RAB4AP20338 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC11.04□□□□□ -0.64
RAB4AP20338 GRIP2-206ENST00000637182 3727 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
RAB4AP20338 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
RAB4AP20338 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC11.04□□□□□ -0.64
RAB4AP20338 KCNC2-201ENST00000298972 3563 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
RAB4AP20338 TACC2-229ENST00000515603 9101 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
RAB4AP20338 CRTAP-201ENST00000320954 6630 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
RAB4AP20338 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC11.04□□□□□ -0.64
RAB4AP20338 PPP1R26P1-201ENST00000474415 3613 ntBASIC11.04□□□□□ -0.64
RAB4AP20338 NRP1-208ENST00000395995 5826 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
RAB4AP20338 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
RAB4AP20338 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RAB4AP20338 PAX6-207ENST00000379129 2614 ntAPPRIS P4 TSL 5 BASIC11.04□□□□□ -0.64
RAB4AP20338 TLK1-205ENST00000431350 5663 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RAB4AP20338 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
RAB4AP20338 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RAB4AP20338 ATXN2L-203ENST00000340394 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
RAB4AP20338 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
RAB4AP20338 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
RAB4AP20338 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
RAB4AP20338 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
RAB4AP20338 AL133267.1-201ENST00000398220 340 ntBASIC11.04□□□□□ -0.64
RAB4AP20338 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC11.04□□□□□ -0.64
RAB4AP20338 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RAB4AP20338 AL671277.1-201ENST00000429656 993 ntBASIC11.04□□□□□ -0.64
RAB4AP20338 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
RAB4AP20338 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC11.04□□□□□ -0.64
RAB4AP20338 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
RAB4AP20338 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
RAB4AP20338 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC11.04□□□□□ -0.64
RAB4AP20338 TBCB-211ENST00000589996 724 ntTSL 3 BASIC11.04□□□□□ -0.64
RAB4AP20338 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC11.04□□□□□ -0.64
RAB4AP20338 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
RAB4AP20338 VPS51-217ENST00000639871 243 ntTSL 5 BASIC11.04□□□□□ -0.64
RAB4AP20338 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RAB4AP20338 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RAB4AP20338 PRKAG3-203ENST00000439262 2301 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RAB4AP20338 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC11.04□□□□□ -0.64
RAB4AP20338 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RAB4AP20338 FMNL1-202ENST00000331495 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RAB4AP20338 ROBO4-208ENST00000533054 3071 ntTSL 2 BASIC11.04□□□□□ -0.64
RAB4AP20338 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC11.04□□□□□ -0.64
RAB4AP20338 TBC1D16-201ENST00000310924 10936 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RAB4AP20338 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
RAB4AP20338 FYCO1-201ENST00000296137 8504 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
RAB4AP20338 AP3S2-201ENST00000336418 5891 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RAB4AP20338 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
RAB4AP20338 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
RAB4AP20338 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
RAB4AP20338 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms