Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC12.63□□□□□ -0.39
ATF1P18846 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC12.63□□□□□ -0.39
ATF1P18846 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ATF1P18846 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC12.63□□□□□ -0.39
ATF1P18846 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC12.63□□□□□ -0.39
ATF1P18846 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC12.63□□□□□ -0.39
ATF1P18846 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
ATF1P18846 AL096865.1-201ENST00000606796 927 ntBASIC12.63□□□□□ -0.39
ATF1P18846 MVK-217ENST00000639206 367 ntTSL 5 BASIC12.63□□□□□ -0.39
ATF1P18846 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ATF1P18846 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ATF1P18846 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ATF1P18846 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ATF1P18846 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ATF1P18846 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ATF1P18846 AL355102.3-201ENST00000554299 1678 ntBASIC12.63□□□□□ -0.39
ATF1P18846 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ATF1P18846 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ATF1P18846 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.63□□□□□ -0.39
ATF1P18846 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
ATF1P18846 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
ATF1P18846 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC12.63□□□□□ -0.39
ATF1P18846 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
ATF1P18846 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
ATF1P18846 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
ATF1P18846 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ATF1P18846 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ATF1P18846 AL359845.1-201ENST00000458202 1648 ntBASIC12.62□□□□□ -0.39
ATF1P18846 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ATF1P18846 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC12.62□□□□□ -0.39
ATF1P18846 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ATF1P18846 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
ATF1P18846 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ATF1P18846 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ATF1P18846 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ATF1P18846 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC12.62□□□□□ -0.39
ATF1P18846 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
ATF1P18846 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ATF1P18846 AL445250.1-201ENST00000641671 2259 ntBASIC12.62□□□□□ -0.39
ATF1P18846 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ATF1P18846 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
ATF1P18846 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ATF1P18846 POM121L14P-201ENST00000406100 1558 ntBASIC12.62□□□□□ -0.39
ATF1P18846 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.62□□□□□ -0.39
ATF1P18846 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ATF1P18846 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ATF1P18846 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
ATF1P18846 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ATF1P18846 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ATF1P18846 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ATF1P18846 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.62□□□□□ -0.39
ATF1P18846 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ATF1P18846 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ATF1P18846 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC12.62□□□□□ -0.39
ATF1P18846 USP17L6P-201ENST00000382470 1197 ntBASIC12.62□□□□□ -0.39
ATF1P18846 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
ATF1P18846 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC12.62□□□□□ -0.39
ATF1P18846 BCRP1-201ENST00000444246 691 ntBASIC12.62□□□□□ -0.39
ATF1P18846 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ATF1P18846 MIR5189-201ENST00000577370 114 ntBASIC12.62□□□□□ -0.39
ATF1P18846 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC12.62□□□□□ -0.39
ATF1P18846 ETV2-208ENST00000621247 941 ntTSL 5 BASIC12.62□□□□□ -0.39
ATF1P18846 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ATF1P18846 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC12.62□□□□□ -0.39
ATF1P18846 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ATF1P18846 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ATF1P18846 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC12.62□□□□□ -0.39
ATF1P18846 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
ATF1P18846 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ATF1P18846 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ATF1P18846 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ATF1P18846 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ATF1P18846 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC12.62□□□□□ -0.39
ATF1P18846 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
ATF1P18846 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ATF1P18846 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
ATF1P18846 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
ATF1P18846 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC12.61□□□□□ -0.39
ATF1P18846 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ATF1P18846 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ATF1P18846 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ATF1P18846 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
ATF1P18846 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ATF1P18846 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
ATF1P18846 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ATF1P18846 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
ATF1P18846 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ATF1P18846 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ATF1P18846 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ATF1P18846 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
ATF1P18846 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ATF1P18846 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ATF1P18846 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
ATF1P18846 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ATF1P18846 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC12.61□□□□□ -0.39
ATF1P18846 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ATF1P18846 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.61□□□□□ -0.39
ATF1P18846 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ATF1P18846 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ATF1P18846 DGCR5-201ENST00000399539 862 ntBASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms