Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL2P13500 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CCL2P13500 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC12.52□□□□□ -0.4
CCL2P13500 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
CCL2P13500 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC12.52□□□□□ -0.4
CCL2P13500 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
CCL2P13500 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC12.52□□□□□ -0.4
CCL2P13500 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CCL2P13500 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.52□□□□□ -0.4
CCL2P13500 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC12.52□□□□□ -0.4
CCL2P13500 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CCL2P13500 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
CCL2P13500 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.52□□□□□ -0.4
CCL2P13500 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CCL2P13500 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.4
CCL2P13500 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
CCL2P13500 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CCL2P13500 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CCL2P13500 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CCL2P13500 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC12.52□□□□□ -0.41
CCL2P13500 AL031595.1-201ENST00000623969 4709 ntBASIC12.52□□□□□ -0.41
CCL2P13500 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCL2P13500 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCL2P13500 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
CCL2P13500 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
CCL2P13500 CRCP-204ENST00000398684 492 ntTSL 2 BASIC12.52□□□□□ -0.41
CCL2P13500 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC12.52□□□□□ -0.41
CCL2P13500 XBP1P1-201ENST00000436573 652 ntBASIC12.52□□□□□ -0.41
CCL2P13500 RCC2P8-201ENST00000502779 1035 ntBASIC12.52□□□□□ -0.41
CCL2P13500 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC12.52□□□□□ -0.41
CCL2P13500 AC009779.1-201ENST00000551138 283 ntBASIC12.52□□□□□ -0.41
CCL2P13500 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC12.52□□□□□ -0.41
CCL2P13500 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC12.52□□□□□ -0.41
CCL2P13500 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC12.52□□□□□ -0.41
CCL2P13500 MIR3615-201ENST00000581999 87 ntBASIC12.52□□□□□ -0.41
CCL2P13500 AC244093.1-201ENST00000610837 814 ntBASIC12.52□□□□□ -0.41
CCL2P13500 AP000346.4-201ENST00000614827 381 ntBASIC12.52□□□□□ -0.41
CCL2P13500 AC138649.2-201ENST00000615886 705 ntBASIC12.52□□□□□ -0.41
CCL2P13500 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC12.52□□□□□ -0.41
CCL2P13500 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCL2P13500 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC12.52□□□□□ -0.41
CCL2P13500 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCL2P13500 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC12.52□□□□□ -0.41
CCL2P13500 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
CCL2P13500 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CCL2P13500 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CCL2P13500 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCL2P13500 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CCL2P13500 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC12.52□□□□□ -0.41
CCL2P13500 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC12.52□□□□□ -0.41
CCL2P13500 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCL2P13500 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCL2P13500 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC12.52□□□□□ -0.41
CCL2P13500 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CCL2P13500 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.52□□□□□ -0.41
CCL2P13500 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCL2P13500 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CCL2P13500 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
CCL2P13500 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCL2P13500 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CCL2P13500 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCL2P13500 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CCL2P13500 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCL2P13500 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12.52□□□□□ -0.41
CCL2P13500 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CCL2P13500 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
CCL2P13500 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL2P13500 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CCL2P13500 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL2P13500 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
CCL2P13500 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CCL2P13500 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC12.51□□□□□ -0.41
CCL2P13500 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCL2P13500 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCL2P13500 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL2P13500 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL2P13500 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL2P13500 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CCL2P13500 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.51□□□□□ -0.41
CCL2P13500 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.51□□□□□ -0.41
CCL2P13500 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.51□□□□□ -0.41
CCL2P13500 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL2P13500 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CCL2P13500 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCL2P13500 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCL2P13500 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCL2P13500 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CCL2P13500 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL2P13500 HNRNPA1P41-201ENST00000397777 928 ntBASIC12.51□□□□□ -0.41
CCL2P13500 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC12.51□□□□□ -0.41
CCL2P13500 GPAA1P2-201ENST00000417923 928 ntBASIC12.51□□□□□ -0.41
CCL2P13500 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC12.51□□□□□ -0.41
CCL2P13500 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL2P13500 FNTAP2-201ENST00000430308 634 ntBASIC12.51□□□□□ -0.41
CCL2P13500 AC078875.1-201ENST00000431907 724 ntBASIC12.51□□□□□ -0.41
CCL2P13500 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC12.51□□□□□ -0.41
CCL2P13500 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC12.51□□□□□ -0.41
CCL2P13500 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCL2P13500 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCL2P13500 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms