Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TPM2P07951 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TPM2P07951 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TPM2P07951 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TPM2P07951 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC16.42■□□□□ 0.22
TPM2P07951 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TPM2P07951 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TPM2P07951 AC135782.3-201ENST00000562782 2105 ntBASIC16.42■□□□□ 0.22
TPM2P07951 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
TPM2P07951 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC16.42■□□□□ 0.22
TPM2P07951 AL445209.1-201ENST00000607269 3491 ntBASIC16.42■□□□□ 0.22
TPM2P07951 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TPM2P07951 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC16.42■□□□□ 0.22
TPM2P07951 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
TPM2P07951 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC16.42■□□□□ 0.22
TPM2P07951 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TPM2P07951 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TPM2P07951 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC16.41■□□□□ 0.22
TPM2P07951 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TPM2P07951 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TPM2P07951 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TPM2P07951 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TPM2P07951 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TPM2P07951 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TPM2P07951 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TPM2P07951 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC16.41■□□□□ 0.22
TPM2P07951 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC16.41■□□□□ 0.22
TPM2P07951 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TPM2P07951 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC16.41■□□□□ 0.22
TPM2P07951 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TPM2P07951 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TPM2P07951 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.41■□□□□ 0.22
TPM2P07951 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC16.41■□□□□ 0.22
TPM2P07951 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TPM2P07951 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.41■□□□□ 0.22
TPM2P07951 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.41■□□□□ 0.22
TPM2P07951 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.41■□□□□ 0.22
TPM2P07951 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.41■□□□□ 0.22
TPM2P07951 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.41■□□□□ 0.22
TPM2P07951 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC16.41■□□□□ 0.22
TPM2P07951 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TPM2P07951 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.41■□□□□ 0.22
TPM2P07951 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TPM2P07951 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TPM2P07951 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TPM2P07951 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.41■□□□□ 0.22
TPM2P07951 SPDYE22P-201ENST00000582158 798 ntBASIC16.41■□□□□ 0.22
TPM2P07951 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TPM2P07951 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TPM2P07951 AC093512.1-201ENST00000617969 520 ntBASIC16.41■□□□□ 0.22
TPM2P07951 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TPM2P07951 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TPM2P07951 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TPM2P07951 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TPM2P07951 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TPM2P07951 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TPM2P07951 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TPM2P07951 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.41■□□□□ 0.22
TPM2P07951 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TPM2P07951 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TPM2P07951 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC16.41■□□□□ 0.22
TPM2P07951 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TPM2P07951 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TPM2P07951 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC16.41■□□□□ 0.22
TPM2P07951 CSF3R-201ENST00000331941 2375 ntTSL 5 BASIC16.41■□□□□ 0.22
TPM2P07951 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TPM2P07951 TOX2-203ENST00000372999 2519 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TPM2P07951 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TPM2P07951 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TPM2P07951 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
TPM2P07951 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TPM2P07951 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC16.4■□□□□ 0.22
TPM2P07951 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TPM2P07951 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TPM2P07951 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TPM2P07951 AL136172.1-201ENST00000598590 1394 ntBASIC16.4■□□□□ 0.22
TPM2P07951 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
TPM2P07951 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TPM2P07951 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TPM2P07951 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC16.4■□□□□ 0.22
TPM2P07951 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TPM2P07951 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TPM2P07951 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TPM2P07951 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TPM2P07951 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TPM2P07951 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TPM2P07951 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TPM2P07951 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.4■□□□□ 0.22
TPM2P07951 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.4■□□□□ 0.22
TPM2P07951 AL442647.2-201ENST00000429864 857 ntBASIC16.4■□□□□ 0.22
TPM2P07951 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.4■□□□□ 0.22
TPM2P07951 GIMAP3P-201ENST00000495150 836 ntBASIC16.4■□□□□ 0.22
TPM2P07951 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TPM2P07951 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.4■□□□□ 0.22
TPM2P07951 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TPM2P07951 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.4■□□□□ 0.22
TPM2P07951 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.4■□□□□ 0.22
TPM2P07951 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.4■□□□□ 0.22
TPM2P07951 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TPM2P07951 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms