Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
TPM3P06753 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
TPM3P06753 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
TPM3P06753 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TPM3P06753 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TPM3P06753 AK2P2-201ENST00000439142 405 ntBASIC16.14■□□□□ 0.17
TPM3P06753 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC16.14■□□□□ 0.17
TPM3P06753 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.14■□□□□ 0.17
TPM3P06753 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.14■□□□□ 0.17
TPM3P06753 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.14■□□□□ 0.17
TPM3P06753 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
TPM3P06753 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.14■□□□□ 0.17
TPM3P06753 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC16.14■□□□□ 0.17
TPM3P06753 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.14■□□□□ 0.17
TPM3P06753 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.14■□□□□ 0.17
TPM3P06753 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TPM3P06753 ABCD1P2-201ENST00000429313 1601 ntBASIC16.14■□□□□ 0.17
TPM3P06753 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TPM3P06753 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
TPM3P06753 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TPM3P06753 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TPM3P06753 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TPM3P06753 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TPM3P06753 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TPM3P06753 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC16.14■□□□□ 0.17
TPM3P06753 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TPM3P06753 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TPM3P06753 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
TPM3P06753 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TPM3P06753 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC16.14■□□□□ 0.17
TPM3P06753 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TPM3P06753 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC16.14■□□□□ 0.17
TPM3P06753 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TPM3P06753 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TPM3P06753 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC16.14■□□□□ 0.17
TPM3P06753 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TPM3P06753 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.13■□□□□ 0.17
TPM3P06753 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TPM3P06753 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TPM3P06753 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC16.13■□□□□ 0.17
TPM3P06753 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TPM3P06753 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TPM3P06753 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC16.13■□□□□ 0.17
TPM3P06753 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TPM3P06753 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TPM3P06753 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC16.13■□□□□ 0.17
TPM3P06753 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC16.13■□□□□ 0.17
TPM3P06753 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TPM3P06753 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TPM3P06753 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TPM3P06753 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC16.13■□□□□ 0.17
TPM3P06753 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TPM3P06753 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TPM3P06753 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TPM3P06753 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TPM3P06753 USP17L6P-201ENST00000382470 1197 ntBASIC16.13■□□□□ 0.17
TPM3P06753 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.13■□□□□ 0.17
TPM3P06753 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.13■□□□□ 0.17
TPM3P06753 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC16.13■□□□□ 0.17
TPM3P06753 AC124283.3-201ENST00000570869 594 ntBASIC16.13■□□□□ 0.17
TPM3P06753 AL390754.1-201ENST00000619088 582 ntBASIC16.13■□□□□ 0.17
TPM3P06753 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TPM3P06753 F10-203ENST00000409306 1450 ntTSL 3 BASIC16.13■□□□□ 0.17
TPM3P06753 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TPM3P06753 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC16.13■□□□□ 0.17
TPM3P06753 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TPM3P06753 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TPM3P06753 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TPM3P06753 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC16.13■□□□□ 0.17
TPM3P06753 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TPM3P06753 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TPM3P06753 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TPM3P06753 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
TPM3P06753 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
TPM3P06753 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC16.13■□□□□ 0.17
TPM3P06753 CARS-214ENST00000529772 2637 ntTSL 2 BASIC16.13■□□□□ 0.17
TPM3P06753 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC16.13■□□□□ 0.17
TPM3P06753 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TPM3P06753 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TPM3P06753 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC16.12■□□□□ 0.17
TPM3P06753 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
TPM3P06753 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC16.12■□□□□ 0.17
TPM3P06753 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TPM3P06753 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TPM3P06753 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC16.12■□□□□ 0.17
TPM3P06753 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TPM3P06753 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TPM3P06753 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC16.12■□□□□ 0.17
TPM3P06753 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TPM3P06753 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TPM3P06753 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TPM3P06753 RN7SKP230-201ENST00000365642 335 ntBASIC16.12■□□□□ 0.17
TPM3P06753 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
TPM3P06753 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TPM3P06753 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.12■□□□□ 0.17
TPM3P06753 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.12■□□□□ 0.17
TPM3P06753 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TPM3P06753 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.12■□□□□ 0.17
TPM3P06753 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.12■□□□□ 0.17
TPM3P06753 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms