Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOA4P06727 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOA4P06727 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.41□□□□□ -0.1
APOA4P06727 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOA4P06727 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.41□□□□□ -0.1
APOA4P06727 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
APOA4P06727 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
APOA4P06727 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
APOA4P06727 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14.41□□□□□ -0.1
APOA4P06727 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.41□□□□□ -0.1
APOA4P06727 RN7SL560P-201ENST00000577943 264 ntBASIC14.41□□□□□ -0.1
APOA4P06727 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.41□□□□□ -0.1
APOA4P06727 AC132192.2-201ENST00000596206 1147 ntBASIC14.41□□□□□ -0.1
APOA4P06727 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.41□□□□□ -0.1
APOA4P06727 AL359881.2-201ENST00000602973 570 ntBASIC14.41□□□□□ -0.1
APOA4P06727 AC009542.2-202ENST00000619004 1067 ntBASIC14.41□□□□□ -0.1
APOA4P06727 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
APOA4P06727 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
APOA4P06727 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOA4P06727 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC14.41□□□□□ -0.1
APOA4P06727 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.41□□□□□ -0.1
APOA4P06727 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOA4P06727 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOA4P06727 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOA4P06727 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOA4P06727 AC079781.5-202ENST00000641784 3743 ntBASIC14.41□□□□□ -0.1
APOA4P06727 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
APOA4P06727 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
APOA4P06727 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC14.41□□□□□ -0.1
APOA4P06727 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
APOA4P06727 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
APOA4P06727 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
APOA4P06727 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.41□□□□□ -0.1
APOA4P06727 E2F3P2-201ENST00000447755 1422 ntBASIC14.41□□□□□ -0.1
APOA4P06727 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOA4P06727 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
APOA4P06727 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOA4P06727 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOA4P06727 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOA4P06727 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOA4P06727 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
APOA4P06727 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOA4P06727 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOA4P06727 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
APOA4P06727 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOA4P06727 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.4□□□□□ -0.1
APOA4P06727 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.4□□□□□ -0.1
APOA4P06727 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.4□□□□□ -0.1
APOA4P06727 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOA4P06727 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOA4P06727 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.4□□□□□ -0.1
APOA4P06727 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
APOA4P06727 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.4□□□□□ -0.1
APOA4P06727 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.4□□□□□ -0.1
APOA4P06727 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.4□□□□□ -0.1
APOA4P06727 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
APOA4P06727 FAM58BP-201ENST00000439056 645 ntBASIC14.4□□□□□ -0.1
APOA4P06727 MTX1P1-201ENST00000440904 838 ntBASIC14.4□□□□□ -0.1
APOA4P06727 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC14.4□□□□□ -0.1
APOA4P06727 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.4□□□□□ -0.1
APOA4P06727 AC100827.2-201ENST00000563214 1194 ntBASIC14.4□□□□□ -0.1
APOA4P06727 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.4□□□□□ -0.1
APOA4P06727 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC14.4□□□□□ -0.1
APOA4P06727 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.4□□□□□ -0.1
APOA4P06727 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
APOA4P06727 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
APOA4P06727 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOA4P06727 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.4□□□□□ -0.1
APOA4P06727 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOA4P06727 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
APOA4P06727 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.4□□□□□ -0.1
APOA4P06727 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOA4P06727 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOA4P06727 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOA4P06727 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
APOA4P06727 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
APOA4P06727 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOA4P06727 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
APOA4P06727 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOA4P06727 AL022313.4-201ENST00000562756 2046 ntBASIC14.39□□□□□ -0.11
APOA4P06727 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
APOA4P06727 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOA4P06727 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOA4P06727 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOA4P06727 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC14.39□□□□□ -0.11
APOA4P06727 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOA4P06727 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.39□□□□□ -0.11
APOA4P06727 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOA4P06727 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOA4P06727 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOA4P06727 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOA4P06727 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
APOA4P06727 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
APOA4P06727 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
APOA4P06727 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.39□□□□□ -0.11
APOA4P06727 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
APOA4P06727 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC14.39□□□□□ -0.11
APOA4P06727 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.39□□□□□ -0.11
APOA4P06727 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.39□□□□□ -0.11
APOA4P06727 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms