Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
MT-ND1P03886 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC13.59□□□□□ -0.23
MT-ND1P03886 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
MT-ND1P03886 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC13.59□□□□□ -0.23
MT-ND1P03886 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
MT-ND1P03886 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
MT-ND1P03886 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MT-ND1P03886 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.59□□□□□ -0.23
MT-ND1P03886 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
MT-ND1P03886 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.59□□□□□ -0.23
MT-ND1P03886 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
MT-ND1P03886 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
MT-ND1P03886 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MT-ND1P03886 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
MT-ND1P03886 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.59□□□□□ -0.23
MT-ND1P03886 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
MT-ND1P03886 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
MT-ND1P03886 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.59□□□□□ -0.23
MT-ND1P03886 AC004233.3-201ENST00000607794 1269 ntBASIC13.59□□□□□ -0.23
MT-ND1P03886 AC005252.2-201ENST00000624630 1141 ntBASIC13.59□□□□□ -0.23
MT-ND1P03886 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC13.59□□□□□ -0.23
MT-ND1P03886 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MT-ND1P03886 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
MT-ND1P03886 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
MT-ND1P03886 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MT-ND1P03886 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
MT-ND1P03886 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MT-ND1P03886 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
MT-ND1P03886 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
MT-ND1P03886 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MT-ND1P03886 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
MT-ND1P03886 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
MT-ND1P03886 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MT-ND1P03886 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
MT-ND1P03886 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
MT-ND1P03886 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MT-ND1P03886 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC13.59□□□□□ -0.23
MT-ND1P03886 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC13.58□□□□□ -0.23
MT-ND1P03886 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
MT-ND1P03886 AL590440.2-201ENST00000641973 1595 ntBASIC13.58□□□□□ -0.23
MT-ND1P03886 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC13.58□□□□□ -0.24
MT-ND1P03886 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC13.58□□□□□ -0.24
MT-ND1P03886 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
MT-ND1P03886 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
MT-ND1P03886 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
MT-ND1P03886 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
MT-ND1P03886 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
MT-ND1P03886 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
MT-ND1P03886 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
MT-ND1P03886 F2-205ENST00000530231 1849 ntTSL 5 BASIC13.58□□□□□ -0.24
MT-ND1P03886 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC13.58□□□□□ -0.24
MT-ND1P03886 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
MT-ND1P03886 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
MT-ND1P03886 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.58□□□□□ -0.24
MT-ND1P03886 MIR770-201ENST00000390219 98 ntBASIC13.58□□□□□ -0.24
MT-ND1P03886 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.58□□□□□ -0.24
MT-ND1P03886 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC13.58□□□□□ -0.24
MT-ND1P03886 TSPY16P-201ENST00000449843 468 ntBASIC13.58□□□□□ -0.24
MT-ND1P03886 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.58□□□□□ -0.24
MT-ND1P03886 KRT18P25-201ENST00000508931 1278 ntBASIC13.58□□□□□ -0.24
MT-ND1P03886 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.58□□□□□ -0.24
MT-ND1P03886 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
MT-ND1P03886 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.58□□□□□ -0.24
MT-ND1P03886 CHCHD2P3-201ENST00000603038 451 ntBASIC13.58□□□□□ -0.24
MT-ND1P03886 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.58□□□□□ -0.24
MT-ND1P03886 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.58□□□□□ -0.24
MT-ND1P03886 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
MT-ND1P03886 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
MT-ND1P03886 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC13.58□□□□□ -0.24
MT-ND1P03886 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC13.58□□□□□ -0.24
MT-ND1P03886 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
MT-ND1P03886 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
MT-ND1P03886 OS9-206ENST00000435406 2346 ntTSL 2 BASIC13.58□□□□□ -0.24
MT-ND1P03886 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
MT-ND1P03886 AC064801.2-201ENST00000625052 1303 ntBASIC13.58□□□□□ -0.24
MT-ND1P03886 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC13.58□□□□□ -0.24
MT-ND1P03886 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
MT-ND1P03886 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC13.58□□□□□ -0.24
MT-ND1P03886 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
MT-ND1P03886 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC13.58□□□□□ -0.24
MT-ND1P03886 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC13.58□□□□□ -0.24
MT-ND1P03886 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC13.58□□□□□ -0.24
MT-ND1P03886 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
MT-ND1P03886 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC13.57□□□□□ -0.24
MT-ND1P03886 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC13.57□□□□□ -0.24
MT-ND1P03886 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MT-ND1P03886 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
MT-ND1P03886 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MT-ND1P03886 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MT-ND1P03886 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MT-ND1P03886 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
MT-ND1P03886 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
MT-ND1P03886 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC13.57□□□□□ -0.24
MT-ND1P03886 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.57□□□□□ -0.24
MT-ND1P03886 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
MT-ND1P03886 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
MT-ND1P03886 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MT-ND1P03886 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MT-ND1P03886 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
MT-ND1P03886 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms