Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 TUBBP5-203ENST00000508529 1334 ntBASIC11.09□□□□□ -0.63
TRBV12-3P01733 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC11.08□□□□□ -0.63
TRBV12-3P01733 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRBV12-3P01733 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRBV12-3P01733 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
TRBV12-3P01733 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC11.08□□□□□ -0.64
TRBV12-3P01733 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC11.08□□□□□ -0.64
TRBV12-3P01733 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC11.08□□□□□ -0.64
TRBV12-3P01733 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC11.08□□□□□ -0.64
TRBV12-3P01733 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
TRBV12-3P01733 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
TRBV12-3P01733 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC11.08□□□□□ -0.64
TRBV12-3P01733 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRBV12-3P01733 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
TRBV12-3P01733 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
TRBV12-3P01733 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRBV12-3P01733 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC11.08□□□□□ -0.64
TRBV12-3P01733 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC11.08□□□□□ -0.64
TRBV12-3P01733 AC090643.2-201ENST00000623442 2029 ntBASIC11.08□□□□□ -0.64
TRBV12-3P01733 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC11.08□□□□□ -0.64
TRBV12-3P01733 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC11.08□□□□□ -0.64
TRBV12-3P01733 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC11.08□□□□□ -0.64
TRBV12-3P01733 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRBV12-3P01733 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
TRBV12-3P01733 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC11.08□□□□□ -0.64
TRBV12-3P01733 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRBV12-3P01733 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRBV12-3P01733 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC11.08□□□□□ -0.64
TRBV12-3P01733 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRBV12-3P01733 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
TRBV12-3P01733 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
TRBV12-3P01733 CMC1-204ENST00000423894 549 ntTSL 2 BASIC11.08□□□□□ -0.64
TRBV12-3P01733 TSPY25P-201ENST00000429463 745 ntBASIC11.08□□□□□ -0.64
TRBV12-3P01733 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC11.08□□□□□ -0.64
TRBV12-3P01733 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
TRBV12-3P01733 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC11.08□□□□□ -0.64
TRBV12-3P01733 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC11.08□□□□□ -0.64
TRBV12-3P01733 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC11.08□□□□□ -0.64
TRBV12-3P01733 ARL16-210ENST00000574938 751 ntTSL 2 BASIC11.08□□□□□ -0.64
TRBV12-3P01733 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC11.08□□□□□ -0.64
TRBV12-3P01733 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC11.08□□□□□ -0.64
TRBV12-3P01733 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC11.08□□□□□ -0.64
TRBV12-3P01733 KLK3-207ENST00000595952 969 ntTSL 3 BASIC11.08□□□□□ -0.64
TRBV12-3P01733 NDUFV2P1-201ENST00000596415 907 ntBASIC11.08□□□□□ -0.64
TRBV12-3P01733 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC11.08□□□□□ -0.64
TRBV12-3P01733 AC091544.8-201ENST00000619490 361 ntBASIC11.08□□□□□ -0.64
TRBV12-3P01733 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC11.08□□□□□ -0.64
TRBV12-3P01733 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC11.08□□□□□ -0.64
TRBV12-3P01733 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRBV12-3P01733 LINC01165-201ENST00000445190 1623 ntBASIC11.08□□□□□ -0.64
TRBV12-3P01733 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
TRBV12-3P01733 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC11.08□□□□□ -0.64
TRBV12-3P01733 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRBV12-3P01733 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRBV12-3P01733 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRBV12-3P01733 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
TRBV12-3P01733 AC005840.4-201ENST00000541242 2494 ntBASIC11.08□□□□□ -0.64
TRBV12-3P01733 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
TRBV12-3P01733 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC11.08□□□□□ -0.64
TRBV12-3P01733 AL157791.1-201ENST00000553667 1699 ntBASIC11.08□□□□□ -0.64
TRBV12-3P01733 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
TRBV12-3P01733 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRBV12-3P01733 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
TRBV12-3P01733 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRBV12-3P01733 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRBV12-3P01733 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
TRBV12-3P01733 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRBV12-3P01733 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRBV12-3P01733 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRBV12-3P01733 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRBV12-3P01733 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
TRBV12-3P01733 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRBV12-3P01733 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC11.07□□□□□ -0.64
TRBV12-3P01733 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRBV12-3P01733 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRBV12-3P01733 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC11.07□□□□□ -0.64
TRBV12-3P01733 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRBV12-3P01733 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
TRBV12-3P01733 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRBV12-3P01733 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRBV12-3P01733 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
TRBV12-3P01733 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
TRBV12-3P01733 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRBV12-3P01733 USP17L6P-201ENST00000382470 1197 ntBASIC11.07□□□□□ -0.64
TRBV12-3P01733 CYP46A4P-201ENST00000414953 267 ntBASIC11.07□□□□□ -0.64
TRBV12-3P01733 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
TRBV12-3P01733 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC11.07□□□□□ -0.64
TRBV12-3P01733 AC005077.2-201ENST00000449786 690 ntBASIC11.07□□□□□ -0.64
TRBV12-3P01733 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC11.07□□□□□ -0.64
TRBV12-3P01733 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRBV12-3P01733 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC11.07□□□□□ -0.64
TRBV12-3P01733 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC11.07□□□□□ -0.64
TRBV12-3P01733 CD164-210ENST00000512821 964 ntTSL 2 BASIC11.07□□□□□ -0.64
TRBV12-3P01733 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC11.07□□□□□ -0.64
TRBV12-3P01733 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC11.07□□□□□ -0.64
TRBV12-3P01733 AC140658.4-201ENST00000561990 352 ntBASIC11.07□□□□□ -0.64
TRBV12-3P01733 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC11.07□□□□□ -0.64
TRBV12-3P01733 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC11.07□□□□□ -0.64
TRBV12-3P01733 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC11.07□□□□□ -0.64
TRBV12-3P01733 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC11.07□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms