Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDGFBP01127 ACTBP14-201ENST00000411655 1089 ntBASIC14.15□□□□□ -0.14
PDGFBP01127 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC14.15□□□□□ -0.14
PDGFBP01127 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC14.15□□□□□ -0.14
PDGFBP01127 AL359092.2-201ENST00000423330 585 ntBASIC14.15□□□□□ -0.14
PDGFBP01127 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC14.15□□□□□ -0.14
PDGFBP01127 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC14.15□□□□□ -0.14
PDGFBP01127 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PDGFBP01127 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC14.15□□□□□ -0.14
PDGFBP01127 PSME2P2-201ENST00000453033 700 ntBASIC14.15□□□□□ -0.14
PDGFBP01127 AC008440.1-201ENST00000455835 439 ntTSL 5 BASIC14.15□□□□□ -0.14
PDGFBP01127 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC14.15□□□□□ -0.14
PDGFBP01127 FAM86JP-202ENST00000484500 988 ntBASIC14.15□□□□□ -0.14
PDGFBP01127 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC14.15□□□□□ -0.14
PDGFBP01127 SPRY4-AS1-206ENST00000515288 539 ntTSL 2 BASIC14.15□□□□□ -0.14
PDGFBP01127 AC010478.1-203ENST00000558403 532 ntTSL 4 BASIC14.15□□□□□ -0.14
PDGFBP01127 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC14.15□□□□□ -0.14
PDGFBP01127 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC14.15□□□□□ -0.14
PDGFBP01127 AC132825.4-202ENST00000578792 434 ntBASIC14.15□□□□□ -0.14
PDGFBP01127 MAFG-AS1-202ENST00000583492 969 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PDGFBP01127 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC14.15□□□□□ -0.14
PDGFBP01127 SRP19-208ENST00000621420 1270 ntTSL 3 BASIC14.15□□□□□ -0.14
PDGFBP01127 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PDGFBP01127 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDGFBP01127 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PDGFBP01127 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDGFBP01127 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
PDGFBP01127 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
PDGFBP01127 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDGFBP01127 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PDGFBP01127 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
PDGFBP01127 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDGFBP01127 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDGFBP01127 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDGFBP01127 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDGFBP01127 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
PDGFBP01127 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.15□□□□□ -0.14
PDGFBP01127 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PDGFBP01127 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
PDGFBP01127 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDGFBP01127 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
PDGFBP01127 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
PDGFBP01127 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PDGFBP01127 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.14□□□□□ -0.15
PDGFBP01127 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDGFBP01127 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
PDGFBP01127 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PDGFBP01127 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDGFBP01127 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.14□□□□□ -0.15
PDGFBP01127 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.14□□□□□ -0.15
PDGFBP01127 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.14□□□□□ -0.15
PDGFBP01127 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDGFBP01127 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDGFBP01127 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PDGFBP01127 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDGFBP01127 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
PDGFBP01127 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PDGFBP01127 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDGFBP01127 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PDGFBP01127 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDGFBP01127 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
PDGFBP01127 AL357833.1-201ENST00000413993 832 ntTSL 3 BASIC14.14□□□□□ -0.15
PDGFBP01127 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC14.14□□□□□ -0.15
PDGFBP01127 RAI1-AS1-201ENST00000443696 724 ntTSL 5 BASIC14.14□□□□□ -0.15
PDGFBP01127 GULOP-201ENST00000454030 748 ntBASIC14.14□□□□□ -0.15
PDGFBP01127 VDAC1P11-201ENST00000458323 852 ntBASIC14.14□□□□□ -0.15
PDGFBP01127 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC14.14□□□□□ -0.15
PDGFBP01127 PRR20FP-201ENST00000603320 180 ntBASIC14.14□□□□□ -0.15
PDGFBP01127 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
PDGFBP01127 AC068418.2-201ENST00000577309 3703 ntBASIC14.14□□□□□ -0.15
PDGFBP01127 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PDGFBP01127 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDGFBP01127 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDGFBP01127 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDGFBP01127 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDGFBP01127 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
PDGFBP01127 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDGFBP01127 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDGFBP01127 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDGFBP01127 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PDGFBP01127 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.14□□□□□ -0.15
PDGFBP01127 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.14□□□□□ -0.15
PDGFBP01127 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDGFBP01127 SIGLEC20P-201ENST00000595243 1311 ntBASIC14.14□□□□□ -0.15
PDGFBP01127 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDGFBP01127 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC14.14□□□□□ -0.15
PDGFBP01127 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDGFBP01127 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDGFBP01127 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.13□□□□□ -0.15
PDGFBP01127 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDGFBP01127 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDGFBP01127 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDGFBP01127 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDGFBP01127 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PDGFBP01127 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC14.13□□□□□ -0.15
PDGFBP01127 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC14.13□□□□□ -0.15
PDGFBP01127 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
PDGFBP01127 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDGFBP01127 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
PDGFBP01127 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms