Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
ZIC3O60481 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC12.83□□□□□ -0.36
ZIC3O60481 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC12.83□□□□□ -0.36
ZIC3O60481 ABR-228ENST00000574437 3196 ntTSL 5 BASIC12.83□□□□□ -0.36
ZIC3O60481 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
ZIC3O60481 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZIC3O60481 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZIC3O60481 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZIC3O60481 BX679664.3-201ENST00000414070 555 ntBASIC12.83□□□□□ -0.36
ZIC3O60481 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC12.83□□□□□ -0.36
ZIC3O60481 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC12.83□□□□□ -0.36
ZIC3O60481 FTH1P22-201ENST00000456305 520 ntBASIC12.83□□□□□ -0.36
ZIC3O60481 AC113935.1-201ENST00000471722 555 ntBASIC12.83□□□□□ -0.36
ZIC3O60481 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC12.83□□□□□ -0.36
ZIC3O60481 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC12.83□□□□□ -0.36
ZIC3O60481 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
ZIC3O60481 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ZIC3O60481 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC12.83□□□□□ -0.36
ZIC3O60481 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC12.83□□□□□ -0.36
ZIC3O60481 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ZIC3O60481 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZIC3O60481 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZIC3O60481 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC12.83□□□□□ -0.36
ZIC3O60481 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.36
ZIC3O60481 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZIC3O60481 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC12.83□□□□□ -0.36
ZIC3O60481 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZIC3O60481 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZIC3O60481 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC12.83□□□□□ -0.36
ZIC3O60481 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZIC3O60481 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC12.83□□□□□ -0.36
ZIC3O60481 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC12.83□□□□□ -0.36
ZIC3O60481 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC12.83□□□□□ -0.36
ZIC3O60481 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ZIC3O60481 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZIC3O60481 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZIC3O60481 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZIC3O60481 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.82□□□□□ -0.36
ZIC3O60481 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ZIC3O60481 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ZIC3O60481 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC12.82□□□□□ -0.36
ZIC3O60481 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC12.82□□□□□ -0.36
ZIC3O60481 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZIC3O60481 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZIC3O60481 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZIC3O60481 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZIC3O60481 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZIC3O60481 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
ZIC3O60481 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ZIC3O60481 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZIC3O60481 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
ZIC3O60481 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ZIC3O60481 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC12.82□□□□□ -0.36
ZIC3O60481 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ZIC3O60481 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZIC3O60481 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC12.82□□□□□ -0.36
ZIC3O60481 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ZIC3O60481 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZIC3O60481 MIR645-201ENST00000385283 94 ntBASIC12.82□□□□□ -0.36
ZIC3O60481 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZIC3O60481 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZIC3O60481 AL592076.1-201ENST00000424448 303 ntBASIC12.82□□□□□ -0.36
ZIC3O60481 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC12.82□□□□□ -0.36
ZIC3O60481 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC12.82□□□□□ -0.36
ZIC3O60481 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC12.82□□□□□ -0.36
ZIC3O60481 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
ZIC3O60481 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ZIC3O60481 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC12.82□□□□□ -0.36
ZIC3O60481 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ZIC3O60481 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC12.82□□□□□ -0.36
ZIC3O60481 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC12.82□□□□□ -0.36
ZIC3O60481 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC12.82□□□□□ -0.36
ZIC3O60481 RN7SL455P-201ENST00000580629 282 ntBASIC12.82□□□□□ -0.36
ZIC3O60481 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
ZIC3O60481 AL133467.4-201ENST00000602953 725 ntBASIC12.82□□□□□ -0.36
ZIC3O60481 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC12.82□□□□□ -0.36
ZIC3O60481 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC12.82□□□□□ -0.36
ZIC3O60481 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZIC3O60481 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
ZIC3O60481 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZIC3O60481 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZIC3O60481 AL591122.2-201ENST00000624125 1853 ntBASIC12.82□□□□□ -0.36
ZIC3O60481 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
ZIC3O60481 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
ZIC3O60481 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZIC3O60481 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC12.82□□□□□ -0.36
ZIC3O60481 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZIC3O60481 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZIC3O60481 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZIC3O60481 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZIC3O60481 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZIC3O60481 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC12.82□□□□□ -0.36
ZIC3O60481 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZIC3O60481 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZIC3O60481 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZIC3O60481 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
ZIC3O60481 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC12.81□□□□□ -0.36
ZIC3O60481 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
ZIC3O60481 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZIC3O60481 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms