Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.09□□□□□ -0.31
NPIPA3F8WFD2 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC13.09□□□□□ -0.31
NPIPA3F8WFD2 AC026320.2-201ENST00000434379 478 ntBASIC13.09□□□□□ -0.31
NPIPA3F8WFD2 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
NPIPA3F8WFD2 RPS2P36-201ENST00000456516 831 ntBASIC13.09□□□□□ -0.31
NPIPA3F8WFD2 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC13.09□□□□□ -0.31
NPIPA3F8WFD2 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC13.09□□□□□ -0.31
NPIPA3F8WFD2 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPA3F8WFD2 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.09□□□□□ -0.31
NPIPA3F8WFD2 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.09□□□□□ -0.31
NPIPA3F8WFD2 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC13.09□□□□□ -0.31
NPIPA3F8WFD2 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPA3F8WFD2 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPA3F8WFD2 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC13.09□□□□□ -0.31
NPIPA3F8WFD2 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.09□□□□□ -0.31
NPIPA3F8WFD2 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC13.09□□□□□ -0.31
NPIPA3F8WFD2 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC13.09□□□□□ -0.31
NPIPA3F8WFD2 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC13.09□□□□□ -0.31
NPIPA3F8WFD2 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC13.09□□□□□ -0.31
NPIPA3F8WFD2 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC13.09□□□□□ -0.31
NPIPA3F8WFD2 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC13.09□□□□□ -0.31
NPIPA3F8WFD2 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPA3F8WFD2 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPA3F8WFD2 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPA3F8WFD2 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPA3F8WFD2 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
NPIPA3F8WFD2 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.09□□□□□ -0.31
NPIPA3F8WFD2 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
NPIPA3F8WFD2 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPA3F8WFD2 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPA3F8WFD2 AHCYP4-201ENST00000419201 1315 ntBASIC13.09□□□□□ -0.31
NPIPA3F8WFD2 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC13.09□□□□□ -0.31
NPIPA3F8WFD2 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPA3F8WFD2 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPA3F8WFD2 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPA3F8WFD2 AC215219.1-201ENST00000400706 1817 ntBASIC13.09□□□□□ -0.31
NPIPA3F8WFD2 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.08□□□□□ -0.31
NPIPA3F8WFD2 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
NPIPA3F8WFD2 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
NPIPA3F8WFD2 AC007191.1-201ENST00000623179 2995 ntBASIC13.08□□□□□ -0.31
NPIPA3F8WFD2 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
NPIPA3F8WFD2 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
NPIPA3F8WFD2 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
NPIPA3F8WFD2 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
NPIPA3F8WFD2 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
NPIPA3F8WFD2 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
NPIPA3F8WFD2 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.08□□□□□ -0.31
NPIPA3F8WFD2 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.08□□□□□ -0.31
NPIPA3F8WFD2 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
NPIPA3F8WFD2 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 AC023908.3-201ENST00000564211 3047 ntBASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 OR2K2-202ENST00000374428 1038 ntBASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 AL627231.1-201ENST00000394467 1125 ntBASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 TSPY25P-201ENST00000429463 745 ntBASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 RPL8P2-201ENST00000430538 502 ntBASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 FGFR3P1-201ENST00000449999 601 ntBASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 AC019193.1-201ENST00000506678 823 ntBASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 CFL1-214ENST00000534769 758 ntTSL 2 BASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 AC027237.1-201ENST00000560942 655 ntBASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 STUB1-204ENST00000564370 875 ntTSL 2 BASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 AC026803.1-201ENST00000569130 274 ntBASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 LINC01783-202ENST00000614408 828 ntBASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 BX284668.2-205ENST00000619677 828 ntBASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 LINC01165-201ENST00000445190 1623 ntBASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms