Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 TSN-212ENST00000536142 3328 ntTSL 2 BASIC10.61□□□□□ -0.71
NACAE9PAV3 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
NACAE9PAV3 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NACAE9PAV3 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
NACAE9PAV3 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
NACAE9PAV3 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NACAE9PAV3 AC215219.1-201ENST00000400706 1817 ntBASIC10.61□□□□□ -0.71
NACAE9PAV3 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
NACAE9PAV3 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
NACAE9PAV3 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NACAE9PAV3 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
NACAE9PAV3 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
NACAE9PAV3 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC10.61□□□□□ -0.71
NACAE9PAV3 BCYRN1-201ENST00000418539 200 ntBASIC10.61□□□□□ -0.71
NACAE9PAV3 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
NACAE9PAV3 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC10.61□□□□□ -0.71
NACAE9PAV3 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC10.61□□□□□ -0.71
NACAE9PAV3 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
NACAE9PAV3 MIR4525-201ENST00000580000 75 ntBASIC10.61□□□□□ -0.71
NACAE9PAV3 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC10.61□□□□□ -0.71
NACAE9PAV3 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC10.61□□□□□ -0.71
NACAE9PAV3 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC10.61□□□□□ -0.71
NACAE9PAV3 BTNL10-201ENST00000595971 695 ntBASIC10.61□□□□□ -0.71
NACAE9PAV3 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NACAE9PAV3 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC10.61□□□□□ -0.71
NACAE9PAV3 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
NACAE9PAV3 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC10.61□□□□□ -0.71
NACAE9PAV3 OS9-207ENST00000439210 1946 ntTSL 2 BASIC10.61□□□□□ -0.71
NACAE9PAV3 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC10.61□□□□□ -0.71
NACAE9PAV3 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC10.61□□□□□ -0.71
NACAE9PAV3 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC10.61□□□□□ -0.71
NACAE9PAV3 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
NACAE9PAV3 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
NACAE9PAV3 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NACAE9PAV3 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NACAE9PAV3 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NACAE9PAV3 CLVS2-201ENST00000275162 11485 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NACAE9PAV3 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NACAE9PAV3 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NACAE9PAV3 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NACAE9PAV3 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NACAE9PAV3 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
NACAE9PAV3 GPR179-203ENST00000616987 7980 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
NACAE9PAV3 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC10.61□□□□□ -0.71
NACAE9PAV3 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NACAE9PAV3 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC10.61□□□□□ -0.71
NACAE9PAV3 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
NACAE9PAV3 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NACAE9PAV3 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
NACAE9PAV3 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NACAE9PAV3 MST1P2-201ENST00000457982 2291 ntBASIC10.61□□□□□ -0.71
NACAE9PAV3 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
NACAE9PAV3 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC10.61□□□□□ -0.71
NACAE9PAV3 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NACAE9PAV3 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
NACAE9PAV3 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
NACAE9PAV3 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC10.61□□□□□ -0.71
NACAE9PAV3 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
NACAE9PAV3 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC10.61□□□□□ -0.71
NACAE9PAV3 KCNMA1-208ENST00000372440 3849 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
NACAE9PAV3 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
NACAE9PAV3 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NACAE9PAV3 CNN2P8-201ENST00000421872 913 ntBASIC10.61□□□□□ -0.71
NACAE9PAV3 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
NACAE9PAV3 ZNF767P-206ENST00000513792 565 ntBASIC10.61□□□□□ -0.71
NACAE9PAV3 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC10.61□□□□□ -0.71
NACAE9PAV3 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
NACAE9PAV3 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
NACAE9PAV3 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NACAE9PAV3 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC10.61□□□□□ -0.71
NACAE9PAV3 RPS15-202ENST00000585665 467 ntTSL 3 BASIC10.61□□□□□ -0.71
NACAE9PAV3 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
NACAE9PAV3 KCNMA1-233ENST00000638351 3849 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
NACAE9PAV3 ACACB-201ENST00000338432 9360 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NACAE9PAV3 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
NACAE9PAV3 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC10.61□□□□□ -0.71
NACAE9PAV3 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
NACAE9PAV3 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
NACAE9PAV3 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
NACAE9PAV3 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC10.6□□□□□ -0.71
NACAE9PAV3 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
NACAE9PAV3 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC10.6□□□□□ -0.71
NACAE9PAV3 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
NACAE9PAV3 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
NACAE9PAV3 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC10.6□□□□□ -0.71
NACAE9PAV3 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC10.6□□□□□ -0.71
NACAE9PAV3 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC10.6□□□□□ -0.71
NACAE9PAV3 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
NACAE9PAV3 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
NACAE9PAV3 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
NACAE9PAV3 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
NACAE9PAV3 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
NACAE9PAV3 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
NACAE9PAV3 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
NACAE9PAV3 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC10.6□□□□□ -0.71
NACAE9PAV3 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC10.6□□□□□ -0.71
NACAE9PAV3 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
NACAE9PAV3 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC10.6□□□□□ -0.71
NACAE9PAV3 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
NACAE9PAV3 PRICKLE1-216ENST00000640132 4278 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms