Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
COLCA2A8K830 LINC00969-213ENST00000445707 2363 ntTSL 2 BASIC10.9□□□□□ -0.66
COLCA2A8K830 DYNC1I1-205ENST00000447467 2947 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
COLCA2A8K830 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
COLCA2A8K830 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
COLCA2A8K830 BLZF1-201ENST00000329281 2300 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
COLCA2A8K830 AL449403.1-201ENST00000432783 1577 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
COLCA2A8K830 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC10.9□□□□□ -0.67
COLCA2A8K830 TBC1D3F-201ENST00000620210 2117 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
COLCA2A8K830 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC10.9□□□□□ -0.67
COLCA2A8K830 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC10.9□□□□□ -0.67
COLCA2A8K830 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.67
COLCA2A8K830 AL162727.1-201ENST00000437712 3043 ntTSL 2 BASIC10.9□□□□□ -0.67
COLCA2A8K830 ZIK1-202ENST00000536878 4144 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.67
COLCA2A8K830 BCKDHA-202ENST00000457836 1745 ntTSL 2 BASIC10.89□□□□□ -0.67
COLCA2A8K830 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC10.89□□□□□ -0.67
COLCA2A8K830 NCDN-202ENST00000373243 3683 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
COLCA2A8K830 SLC2A1-203ENST00000426263 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
COLCA2A8K830 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
COLCA2A8K830 AGO2-205ENST00000519980 3141 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
COLCA2A8K830 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC10.89□□□□□ -0.67
COLCA2A8K830 CASC4-202ENST00000345795 3764 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
COLCA2A8K830 SLC22A12-204ENST00000377574 3206 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
COLCA2A8K830 ALOX5-201ENST00000374391 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
COLCA2A8K830 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
COLCA2A8K830 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
COLCA2A8K830 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
COLCA2A8K830 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
COLCA2A8K830 C2orf69-201ENST00000319974 3728 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
COLCA2A8K830 NLRP2-209ENST00000537859 3507 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
COLCA2A8K830 AL590428.1-201ENST00000428865 1973 ntTSL 2 BASIC10.89□□□□□ -0.67
COLCA2A8K830 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
COLCA2A8K830 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
COLCA2A8K830 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
COLCA2A8K830 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
COLCA2A8K830 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
COLCA2A8K830 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
COLCA2A8K830 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
COLCA2A8K830 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
COLCA2A8K830 MRPL20P1-201ENST00000400819 433 ntBASIC10.89□□□□□ -0.67
COLCA2A8K830 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
COLCA2A8K830 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC10.89□□□□□ -0.67
COLCA2A8K830 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
COLCA2A8K830 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC10.89□□□□□ -0.67
COLCA2A8K830 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC10.89□□□□□ -0.67
COLCA2A8K830 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
COLCA2A8K830 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
COLCA2A8K830 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC10.89□□□□□ -0.67
COLCA2A8K830 INO80C-210ENST00000590757 595 ntTSL 2 BASIC10.89□□□□□ -0.67
COLCA2A8K830 RGL4-209ENST00000612432 2649 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
COLCA2A8K830 CHST15-202ENST00000435907 4820 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
COLCA2A8K830 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
COLCA2A8K830 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
COLCA2A8K830 TRIM37-203ENST00000393066 3622 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
COLCA2A8K830 LINC00664-203ENST00000599078 3760 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
COLCA2A8K830 CNTROB-202ENST00000563694 3705 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
COLCA2A8K830 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
COLCA2A8K830 MTERF2-207ENST00000552029 3235 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
COLCA2A8K830 PHACTR3-205ENST00000395636 2372 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
COLCA2A8K830 ENOSF1-203ENST00000383578 4188 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
COLCA2A8K830 CPNE4-201ENST00000429747 4184 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
COLCA2A8K830 AGK-201ENST00000355413 3849 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
COLCA2A8K830 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
COLCA2A8K830 POFUT2-213ENST00000612472 2959 ntTSL 5 BASIC10.89□□□□□ -0.67
COLCA2A8K830 LGALS9-203ENST00000395473 3114 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
COLCA2A8K830 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
COLCA2A8K830 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
COLCA2A8K830 RABGAP1L-207ENST00000367690 1815 ntTSL 2 BASIC10.88□□□□□ -0.67
COLCA2A8K830 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC10.88□□□□□ -0.67
COLCA2A8K830 RNF4-222ENST00000541204 2796 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
COLCA2A8K830 PPP4R1-202ENST00000400555 3885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
COLCA2A8K830 CEP89-207ENST00000591863 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
COLCA2A8K830 ARHGEF3-213ENST00000496106 1994 ntTSL 2 BASIC10.88□□□□□ -0.67
COLCA2A8K830 POLR3E-201ENST00000299853 3697 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
COLCA2A8K830 PXN-204ENST00000424649 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
COLCA2A8K830 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC10.88□□□□□ -0.67
COLCA2A8K830 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
COLCA2A8K830 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
COLCA2A8K830 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
COLCA2A8K830 DNAI2-201ENST00000311014 2236 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
COLCA2A8K830 ATP4A-201ENST00000262623 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
COLCA2A8K830 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
COLCA2A8K830 OPRK1-201ENST00000265572 5014 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
COLCA2A8K830 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
COLCA2A8K830 PPIH-202ENST00000372549 327 ntTSL 3 BASIC10.88□□□□□ -0.67
COLCA2A8K830 AC139712.1-201ENST00000378256 1875 ntBASIC10.88□□□□□ -0.67
COLCA2A8K830 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
COLCA2A8K830 DDT-204ENST00000404092 805 ntTSL 3 BASIC10.88□□□□□ -0.67
COLCA2A8K830 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC10.88□□□□□ -0.67
COLCA2A8K830 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC10.88□□□□□ -0.67
COLCA2A8K830 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC10.88□□□□□ -0.67
COLCA2A8K830 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
COLCA2A8K830 BET1L-206ENST00000486280 665 ntTSL 3 BASIC10.88□□□□□ -0.67
COLCA2A8K830 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC10.88□□□□□ -0.67
COLCA2A8K830 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC10.88□□□□□ -0.67
COLCA2A8K830 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC10.88□□□□□ -0.67
COLCA2A8K830 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC10.88□□□□□ -0.67
COLCA2A8K830 NDUFV2-AS1-203ENST00000608008 779 ntBASIC10.88□□□□□ -0.67
COLCA2A8K830 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC10.88□□□□□ -0.67
COLCA2A8K830 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC10.88□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms