Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
SRRM4A7MD48 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC11.55□□□□□ -0.56
SRRM4A7MD48 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
SRRM4A7MD48 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC11.55□□□□□ -0.56
SRRM4A7MD48 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC11.55□□□□□ -0.56
SRRM4A7MD48 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SRRM4A7MD48 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SRRM4A7MD48 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
SRRM4A7MD48 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SRRM4A7MD48 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC11.55□□□□□ -0.56
SRRM4A7MD48 USP39-207ENST00000450066 2086 ntTSL 2 BASIC11.55□□□□□ -0.56
SRRM4A7MD48 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SRRM4A7MD48 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC11.55□□□□□ -0.56
SRRM4A7MD48 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SRRM4A7MD48 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SRRM4A7MD48 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC11.55□□□□□ -0.56
SRRM4A7MD48 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SRRM4A7MD48 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC11.55□□□□□ -0.56
SRRM4A7MD48 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SRRM4A7MD48 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC11.55□□□□□ -0.56
SRRM4A7MD48 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC11.55□□□□□ -0.56
SRRM4A7MD48 FAM58BP-201ENST00000439056 645 ntBASIC11.55□□□□□ -0.56
SRRM4A7MD48 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC11.55□□□□□ -0.56
SRRM4A7MD48 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC11.55□□□□□ -0.56
SRRM4A7MD48 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC11.55□□□□□ -0.56
SRRM4A7MD48 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC11.55□□□□□ -0.56
SRRM4A7MD48 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC11.55□□□□□ -0.56
SRRM4A7MD48 DUX4L45-201ENST00000566406 1057 ntBASIC11.55□□□□□ -0.56
SRRM4A7MD48 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC11.55□□□□□ -0.56
SRRM4A7MD48 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SRRM4A7MD48 DRG2-220ENST00000583355 891 ntTSL 3 BASIC11.55□□□□□ -0.56
SRRM4A7MD48 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC11.55□□□□□ -0.56
SRRM4A7MD48 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC11.55□□□□□ -0.56
SRRM4A7MD48 RPL35-206ENST00000629845 340 ntTSL 5 BASIC11.55□□□□□ -0.56
SRRM4A7MD48 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SRRM4A7MD48 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SRRM4A7MD48 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC11.55□□□□□ -0.56
SRRM4A7MD48 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SRRM4A7MD48 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
SRRM4A7MD48 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
SRRM4A7MD48 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SRRM4A7MD48 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
SRRM4A7MD48 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SRRM4A7MD48 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SRRM4A7MD48 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SRRM4A7MD48 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SRRM4A7MD48 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SRRM4A7MD48 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC11.55□□□□□ -0.56
SRRM4A7MD48 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SRRM4A7MD48 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SRRM4A7MD48 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SRRM4A7MD48 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SRRM4A7MD48 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SRRM4A7MD48 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SRRM4A7MD48 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SRRM4A7MD48 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC11.55□□□□□ -0.56
SRRM4A7MD48 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
SRRM4A7MD48 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
SRRM4A7MD48 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC11.54□□□□□ -0.56
SRRM4A7MD48 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC11.54□□□□□ -0.56
SRRM4A7MD48 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SRRM4A7MD48 RET-205ENST00000615310 4337 ntTSL 5 BASIC11.54□□□□□ -0.56
SRRM4A7MD48 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SRRM4A7MD48 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SRRM4A7MD48 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SRRM4A7MD48 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
SRRM4A7MD48 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
SRRM4A7MD48 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC11.54□□□□□ -0.56
SRRM4A7MD48 AC005014.1-201ENST00000432006 2976 ntBASIC11.54□□□□□ -0.56
SRRM4A7MD48 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC11.54□□□□□ -0.56
SRRM4A7MD48 TCAF1P1-201ENST00000414990 2232 ntBASIC11.54□□□□□ -0.56
SRRM4A7MD48 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SRRM4A7MD48 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SRRM4A7MD48 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SRRM4A7MD48 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SRRM4A7MD48 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SRRM4A7MD48 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC11.54□□□□□ -0.56
SRRM4A7MD48 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC11.54□□□□□ -0.56
SRRM4A7MD48 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC11.54□□□□□ -0.56
SRRM4A7MD48 STX1A-203ENST00000395155 783 ntTSL 2 BASIC11.54□□□□□ -0.56
SRRM4A7MD48 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
SRRM4A7MD48 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SRRM4A7MD48 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
SRRM4A7MD48 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC11.54□□□□□ -0.56
SRRM4A7MD48 AC005034.1-201ENST00000426657 489 ntBASIC11.54□□□□□ -0.56
SRRM4A7MD48 OLR1-203ENST00000432556 950 ntTSL 2 BASIC11.54□□□□□ -0.56
SRRM4A7MD48 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
SRRM4A7MD48 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SRRM4A7MD48 AC006122.1-201ENST00000493323 440 ntBASIC11.54□□□□□ -0.56
SRRM4A7MD48 AC119751.2-201ENST00000504529 210 ntBASIC11.54□□□□□ -0.56
SRRM4A7MD48 AC022217.1-201ENST00000521069 738 ntBASIC11.54□□□□□ -0.56
SRRM4A7MD48 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC11.54□□□□□ -0.56
SRRM4A7MD48 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC11.54□□□□□ -0.56
SRRM4A7MD48 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC11.54□□□□□ -0.56
SRRM4A7MD48 EEF1DP1-201ENST00000585891 896 ntBASIC11.54□□□□□ -0.56
SRRM4A7MD48 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC11.54□□□□□ -0.56
SRRM4A7MD48 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC11.54□□□□□ -0.56
SRRM4A7MD48 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC11.54□□□□□ -0.56
SRRM4A7MD48 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
SRRM4A7MD48 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC11.54□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms