Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.21■□□□□ 0.19
TMEM88BA6NKF7 DUT-208ENST00000559540 1441 ntTSL 2 BASIC16.21■□□□□ 0.19
TMEM88BA6NKF7 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM88BA6NKF7 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM88BA6NKF7 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM88BA6NKF7 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM88BA6NKF7 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
TMEM88BA6NKF7 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM88BA6NKF7 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TMEM88BA6NKF7 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC16.21■□□□□ 0.19
TMEM88BA6NKF7 NOS2P3-201ENST00000411468 867 ntBASIC16.21■□□□□ 0.19
TMEM88BA6NKF7 KDM5C-IT1-201ENST00000412242 755 ntTSL 5 BASIC16.21■□□□□ 0.19
TMEM88BA6NKF7 RPSAP6-201ENST00000417882 882 ntBASIC16.21■□□□□ 0.19
TMEM88BA6NKF7 NOS2P2-201ENST00000426269 867 ntBASIC16.21■□□□□ 0.19
TMEM88BA6NKF7 AC005722.1-201ENST00000431878 964 ntBASIC16.21■□□□□ 0.19
TMEM88BA6NKF7 TMCO1-203ENST00000464650 1100 ntTSL 2 BASIC16.21■□□□□ 0.19
TMEM88BA6NKF7 RN7SL677P-201ENST00000466970 319 ntBASIC16.21■□□□□ 0.19
TMEM88BA6NKF7 YBX1P3-201ENST00000468366 909 ntBASIC16.21■□□□□ 0.19
TMEM88BA6NKF7 AP001107.9-202ENST00000531602 613 ntTSL 2 BASIC16.21■□□□□ 0.19
TMEM88BA6NKF7 TRAPPC4-212ENST00000533058 1209 ntTSL 2 BASIC16.21■□□□□ 0.19
TMEM88BA6NKF7 AC025419.1-201ENST00000537250 690 ntTSL 3 BASIC16.21■□□□□ 0.19
TMEM88BA6NKF7 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC16.21■□□□□ 0.19
TMEM88BA6NKF7 AC026120.2-201ENST00000617239 309 ntBASIC16.21■□□□□ 0.19
TMEM88BA6NKF7 AC093495.1-215ENST00000626655 821 ntTSL 5 BASIC16.21■□□□□ 0.19
TMEM88BA6NKF7 ADORA3-204ENST00000632535 1201 ntTSL 3 BASIC16.21■□□□□ 0.19
TMEM88BA6NKF7 LINC01002-223ENST00000633179 407 ntTSL 5 BASIC16.21■□□□□ 0.19
TMEM88BA6NKF7 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM88BA6NKF7 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM88BA6NKF7 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TMEM88BA6NKF7 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM88BA6NKF7 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TMEM88BA6NKF7 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.21■□□□□ 0.19
TMEM88BA6NKF7 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM88BA6NKF7 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TMEM88BA6NKF7 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.21■□□□□ 0.19
TMEM88BA6NKF7 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.21■□□□□ 0.19
TMEM88BA6NKF7 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM88BA6NKF7 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TMEM88BA6NKF7 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TMEM88BA6NKF7 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
TMEM88BA6NKF7 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TMEM88BA6NKF7 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TMEM88BA6NKF7 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC16.21■□□□□ 0.18
TMEM88BA6NKF7 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
TMEM88BA6NKF7 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TMEM88BA6NKF7 TUBA3GP-201ENST00000410028 1325 ntBASIC16.2■□□□□ 0.18
TMEM88BA6NKF7 AC069061.4-201ENST00000581294 1347 ntBASIC16.2■□□□□ 0.18
TMEM88BA6NKF7 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC16.2■□□□□ 0.18
TMEM88BA6NKF7 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM88BA6NKF7 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.2■□□□□ 0.18
TMEM88BA6NKF7 NME1-209ENST00000511355 1645 ntTSL 5 BASIC16.2■□□□□ 0.18
TMEM88BA6NKF7 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM88BA6NKF7 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TMEM88BA6NKF7 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TMEM88BA6NKF7 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM88BA6NKF7 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM88BA6NKF7 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM88BA6NKF7 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM88BA6NKF7 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM88BA6NKF7 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC16.2■□□□□ 0.18
TMEM88BA6NKF7 MIR766-201ENST00000390223 111 ntBASIC16.2■□□□□ 0.18
TMEM88BA6NKF7 MB-204ENST00000401702 1043 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM88BA6NKF7 AP005273.1-201ENST00000444862 522 ntTSL 3 BASIC16.2■□□□□ 0.18
TMEM88BA6NKF7 HNRNPA1P73-201ENST00000446472 928 ntBASIC16.2■□□□□ 0.18
TMEM88BA6NKF7 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC16.2■□□□□ 0.18
TMEM88BA6NKF7 CD81-209ENST00000492627 886 ntTSL 3 BASIC16.2■□□□□ 0.18
TMEM88BA6NKF7 AC022784.6-202ENST00000523246 674 ntTSL 5 BASIC16.2■□□□□ 0.18
TMEM88BA6NKF7 CD44-224ENST00000526669 870 ntTSL 5 BASIC16.2■□□□□ 0.18
TMEM88BA6NKF7 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM88BA6NKF7 AL136040.1-201ENST00000557775 601 ntTSL 3 BASIC16.2■□□□□ 0.18
TMEM88BA6NKF7 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC16.2■□□□□ 0.18
TMEM88BA6NKF7 AC006504.5-210ENST00000585827 539 ntTSL 4 BASIC16.2■□□□□ 0.18
TMEM88BA6NKF7 AC114296.1-202ENST00000638019 771 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TMEM88BA6NKF7 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
TMEM88BA6NKF7 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM88BA6NKF7 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TMEM88BA6NKF7 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM88BA6NKF7 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM88BA6NKF7 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM88BA6NKF7 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM88BA6NKF7 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM88BA6NKF7 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM88BA6NKF7 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
TMEM88BA6NKF7 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM88BA6NKF7 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM88BA6NKF7 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.2■□□□□ 0.18
TMEM88BA6NKF7 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM88BA6NKF7 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.19■□□□□ 0.18
TMEM88BA6NKF7 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.19■□□□□ 0.18
TMEM88BA6NKF7 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM88BA6NKF7 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.19■□□□□ 0.18
TMEM88BA6NKF7 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM88BA6NKF7 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TMEM88BA6NKF7 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.19■□□□□ 0.18
TMEM88BA6NKF7 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.19■□□□□ 0.18
TMEM88BA6NKF7 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM88BA6NKF7 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM88BA6NKF7 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC16.19■□□□□ 0.18
TMEM88BA6NKF7 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM88BA6NKF7 CAV2-202ENST00000343213 776 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms