Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 AC006015.1-201ENST00000429970 570 ntBASIC25.84■■□□□ 1.73
PTCH2Q9Y6C5 TMEM191A-211ENST00000637163 1067 ntBASIC25.84■■□□□ 1.73
PTCH2Q9Y6C5 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC25.84■■□□□ 1.73
PTCH2Q9Y6C5 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
PTCH2Q9Y6C5 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PTCH2Q9Y6C5 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC25.83■■□□□ 1.73
PTCH2Q9Y6C5 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC25.83■■□□□ 1.73
PTCH2Q9Y6C5 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
PTCH2Q9Y6C5 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PTCH2Q9Y6C5 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC25.83■■□□□ 1.73
PTCH2Q9Y6C5 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
PTCH2Q9Y6C5 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC25.83■■□□□ 1.73
PTCH2Q9Y6C5 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC25.83■■□□□ 1.73
PTCH2Q9Y6C5 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
PTCH2Q9Y6C5 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC25.83■■□□□ 1.73
PTCH2Q9Y6C5 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
PTCH2Q9Y6C5 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PTCH2Q9Y6C5 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PTCH2Q9Y6C5 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC25.82■■□□□ 1.72
PTCH2Q9Y6C5 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
PTCH2Q9Y6C5 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC25.82■■□□□ 1.72
PTCH2Q9Y6C5 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC25.82■■□□□ 1.72
PTCH2Q9Y6C5 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC25.82■■□□□ 1.72
PTCH2Q9Y6C5 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PTCH2Q9Y6C5 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PTCH2Q9Y6C5 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PTCH2Q9Y6C5 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC25.81■■□□□ 1.72
PTCH2Q9Y6C5 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PTCH2Q9Y6C5 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PTCH2Q9Y6C5 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC25.81■■□□□ 1.72
PTCH2Q9Y6C5 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
PTCH2Q9Y6C5 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC25.81■■□□□ 1.72
PTCH2Q9Y6C5 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC25.81■■□□□ 1.72
PTCH2Q9Y6C5 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC25.81■■□□□ 1.72
PTCH2Q9Y6C5 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC25.8■■□□□ 1.72
PTCH2Q9Y6C5 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC25.8■■□□□ 1.72
PTCH2Q9Y6C5 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC25.8■■□□□ 1.72
PTCH2Q9Y6C5 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PTCH2Q9Y6C5 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
PTCH2Q9Y6C5 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PTCH2Q9Y6C5 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC25.8■■□□□ 1.72
PTCH2Q9Y6C5 KRT18P61-201ENST00000585825 1298 ntBASIC25.8■■□□□ 1.72
PTCH2Q9Y6C5 AL022069.1-201ENST00000568025 1636 ntBASIC25.8■■□□□ 1.72
PTCH2Q9Y6C5 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
PTCH2Q9Y6C5 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
PTCH2Q9Y6C5 AL355802.2-201ENST00000402069 882 ntBASIC25.79■■□□□ 1.72
PTCH2Q9Y6C5 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC25.79■■□□□ 1.72
PTCH2Q9Y6C5 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC25.79■■□□□ 1.72
PTCH2Q9Y6C5 PPP1R14BP3-201ENST00000509033 445 ntBASIC25.79■■□□□ 1.72
PTCH2Q9Y6C5 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC25.79■■□□□ 1.72
PTCH2Q9Y6C5 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
PTCH2Q9Y6C5 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
PTCH2Q9Y6C5 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
PTCH2Q9Y6C5 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC25.78■■□□□ 1.72
PTCH2Q9Y6C5 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC25.78■■□□□ 1.72
PTCH2Q9Y6C5 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC25.78■■□□□ 1.72
PTCH2Q9Y6C5 MAP2K4P1-201ENST00000438453 1195 ntBASIC25.78■■□□□ 1.72
PTCH2Q9Y6C5 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
PTCH2Q9Y6C5 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
PTCH2Q9Y6C5 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
PTCH2Q9Y6C5 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
PTCH2Q9Y6C5 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
PTCH2Q9Y6C5 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
PTCH2Q9Y6C5 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC25.78■■□□□ 1.72
PTCH2Q9Y6C5 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC25.78■■□□□ 1.72
PTCH2Q9Y6C5 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PTCH2Q9Y6C5 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC25.77■■□□□ 1.72
PTCH2Q9Y6C5 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
PTCH2Q9Y6C5 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
PTCH2Q9Y6C5 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC25.77■■□□□ 1.72
PTCH2Q9Y6C5 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC25.77■■□□□ 1.72
PTCH2Q9Y6C5 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC25.77■■□□□ 1.72
PTCH2Q9Y6C5 AC066615.1-201ENST00000640911 628 ntBASIC25.77■■□□□ 1.72
PTCH2Q9Y6C5 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC25.77■■□□□ 1.72
PTCH2Q9Y6C5 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
PTCH2Q9Y6C5 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC25.77■■□□□ 1.72
PTCH2Q9Y6C5 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC25.77■■□□□ 1.72
PTCH2Q9Y6C5 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC25.77■■□□□ 1.72
PTCH2Q9Y6C5 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC25.76■■□□□ 1.71
PTCH2Q9Y6C5 NT5C3AP1-201ENST00000394500 1012 ntBASIC25.76■■□□□ 1.71
PTCH2Q9Y6C5 AC016769.1-201ENST00000409132 1010 ntBASIC25.76■■□□□ 1.71
PTCH2Q9Y6C5 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC25.76■■□□□ 1.71
PTCH2Q9Y6C5 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.76■■□□□ 1.71
PTCH2Q9Y6C5 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
PTCH2Q9Y6C5 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC25.76■■□□□ 1.71
PTCH2Q9Y6C5 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
PTCH2Q9Y6C5 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
PTCH2Q9Y6C5 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
PTCH2Q9Y6C5 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC25.75■■□□□ 1.71
PTCH2Q9Y6C5 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
PTCH2Q9Y6C5 AC026185.1-201ENST00000445748 174 ntBASIC25.75■■□□□ 1.71
PTCH2Q9Y6C5 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
PTCH2Q9Y6C5 AC137761.2-201ENST00000561729 223 ntBASIC25.75■■□□□ 1.71
PTCH2Q9Y6C5 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC25.75■■□□□ 1.71
PTCH2Q9Y6C5 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC25.75■■□□□ 1.71
PTCH2Q9Y6C5 AC145350.3-201ENST00000569033 163 ntBASIC25.75■■□□□ 1.71
PTCH2Q9Y6C5 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC25.75■■□□□ 1.71
PTCH2Q9Y6C5 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC25.74■■□□□ 1.71
PTCH2Q9Y6C5 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
PTCH2Q9Y6C5 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms