Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CLIC4Q9Y696 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CLIC4Q9Y696 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CLIC4Q9Y696 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC25.85■■□□□ 1.73
CLIC4Q9Y696 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC25.85■■□□□ 1.73
CLIC4Q9Y696 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CLIC4Q9Y696 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC25.85■■□□□ 1.73
CLIC4Q9Y696 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
CLIC4Q9Y696 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC25.85■■□□□ 1.73
CLIC4Q9Y696 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CLIC4Q9Y696 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CLIC4Q9Y696 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CLIC4Q9Y696 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC25.84■■□□□ 1.73
CLIC4Q9Y696 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CLIC4Q9Y696 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC25.84■■□□□ 1.73
CLIC4Q9Y696 TK2-216ENST00000564917 1156 ntTSL 3 BASIC25.84■■□□□ 1.73
CLIC4Q9Y696 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC25.84■■□□□ 1.73
CLIC4Q9Y696 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
CLIC4Q9Y696 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
CLIC4Q9Y696 USF2-207ENST00000595068 1612 ntTSL 5 BASIC25.84■■□□□ 1.73
CLIC4Q9Y696 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CLIC4Q9Y696 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC25.84■■□□□ 1.73
CLIC4Q9Y696 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CLIC4Q9Y696 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
CLIC4Q9Y696 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
CLIC4Q9Y696 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CLIC4Q9Y696 SENP5-202ENST00000419026 973 ntTSL 3 BASIC25.83■■□□□ 1.73
CLIC4Q9Y696 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC25.83■■□□□ 1.73
CLIC4Q9Y696 SNX5-217ENST00000606557 1087 ntBASIC25.83■■□□□ 1.73
CLIC4Q9Y696 AL031848.2-201ENST00000607670 837 ntBASIC25.83■■□□□ 1.73
CLIC4Q9Y696 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
CLIC4Q9Y696 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CLIC4Q9Y696 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
CLIC4Q9Y696 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC25.83■■□□□ 1.73
CLIC4Q9Y696 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CLIC4Q9Y696 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CLIC4Q9Y696 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC25.82■■□□□ 1.72
CLIC4Q9Y696 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC25.82■■□□□ 1.72
CLIC4Q9Y696 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CLIC4Q9Y696 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC25.82■■□□□ 1.72
CLIC4Q9Y696 AC137630.3-201ENST00000607245 391 ntBASIC25.82■■□□□ 1.72
CLIC4Q9Y696 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
CLIC4Q9Y696 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC25.81■■□□□ 1.72
CLIC4Q9Y696 AC079630.1-202ENST00000618127 1840 ntBASIC25.81■■□□□ 1.72
CLIC4Q9Y696 C1orf229-201ENST00000623686 2258 ntBASIC25.81■■□□□ 1.72
CLIC4Q9Y696 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC25.81■■□□□ 1.72
CLIC4Q9Y696 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC25.81■■□□□ 1.72
CLIC4Q9Y696 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC25.81■■□□□ 1.72
CLIC4Q9Y696 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC25.81■■□□□ 1.72
CLIC4Q9Y696 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC25.81■■□□□ 1.72
CLIC4Q9Y696 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CLIC4Q9Y696 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC25.81■■□□□ 1.72
CLIC4Q9Y696 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
CLIC4Q9Y696 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CLIC4Q9Y696 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
CLIC4Q9Y696 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CLIC4Q9Y696 TK2-202ENST00000417693 1046 ntTSL 2 BASIC25.8■■□□□ 1.72
CLIC4Q9Y696 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC25.8■■□□□ 1.72
CLIC4Q9Y696 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CLIC4Q9Y696 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CLIC4Q9Y696 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CLIC4Q9Y696 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CLIC4Q9Y696 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
CLIC4Q9Y696 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC25.79■■□□□ 1.72
CLIC4Q9Y696 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CLIC4Q9Y696 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC25.78■■□□□ 1.72
CLIC4Q9Y696 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
CLIC4Q9Y696 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
CLIC4Q9Y696 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
CLIC4Q9Y696 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
CLIC4Q9Y696 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC25.78■■□□□ 1.72
CLIC4Q9Y696 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
CLIC4Q9Y696 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC25.78■■□□□ 1.72
CLIC4Q9Y696 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
CLIC4Q9Y696 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CLIC4Q9Y696 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CLIC4Q9Y696 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CLIC4Q9Y696 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
CLIC4Q9Y696 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC25.77■■□□□ 1.72
CLIC4Q9Y696 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CLIC4Q9Y696 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC25.77■■□□□ 1.72
CLIC4Q9Y696 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
CLIC4Q9Y696 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
CLIC4Q9Y696 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.72
CLIC4Q9Y696 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC25.76■■□□□ 1.72
CLIC4Q9Y696 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CLIC4Q9Y696 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC25.76■■□□□ 1.71
CLIC4Q9Y696 LSM7-203ENST00000585409 512 ntTSL 2 BASIC25.76■■□□□ 1.71
CLIC4Q9Y696 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC25.76■■□□□ 1.71
CLIC4Q9Y696 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC25.76■■□□□ 1.71
CLIC4Q9Y696 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CLIC4Q9Y696 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CLIC4Q9Y696 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
CLIC4Q9Y696 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
CLIC4Q9Y696 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CLIC4Q9Y696 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC25.75■■□□□ 1.71
CLIC4Q9Y696 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC25.75■■□□□ 1.71
CLIC4Q9Y696 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CLIC4Q9Y696 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC25.74■■□□□ 1.71
CLIC4Q9Y696 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms