Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGB1Q9Y5G3 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.65■□□□□ 0.9
PCDHGB1Q9Y5G3 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PCDHGB1Q9Y5G3 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.64■□□□□ 0.9
PCDHGB1Q9Y5G3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.64■□□□□ 0.9
PCDHGB1Q9Y5G3 ESRRAP2-201ENST00000418437 1549 ntBASIC20.64■□□□□ 0.9
PCDHGB1Q9Y5G3 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGB1Q9Y5G3 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGB1Q9Y5G3 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGB1Q9Y5G3 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.64■□□□□ 0.89
PCDHGB1Q9Y5G3 AC093536.1-201ENST00000569153 554 ntBASIC20.64■□□□□ 0.89
PCDHGB1Q9Y5G3 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGB1Q9Y5G3 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGB1Q9Y5G3 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.63■□□□□ 0.89
PCDHGB1Q9Y5G3 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PCDHGB1Q9Y5G3 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDHGB1Q9Y5G3 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
PCDHGB1Q9Y5G3 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PCDHGB1Q9Y5G3 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGB1Q9Y5G3 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.63■□□□□ 0.89
PCDHGB1Q9Y5G3 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGB1Q9Y5G3 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
PCDHGB1Q9Y5G3 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGB1Q9Y5G3 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGB1Q9Y5G3 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGB1Q9Y5G3 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.62■□□□□ 0.89
PCDHGB1Q9Y5G3 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGB1Q9Y5G3 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGB1Q9Y5G3 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGB1Q9Y5G3 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGB1Q9Y5G3 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGB1Q9Y5G3 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
PCDHGB1Q9Y5G3 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGB1Q9Y5G3 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDHGB1Q9Y5G3 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
PCDHGB1Q9Y5G3 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGB1Q9Y5G3 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGB1Q9Y5G3 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.61■□□□□ 0.89
PCDHGB1Q9Y5G3 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGB1Q9Y5G3 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDHGB1Q9Y5G3 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
PCDHGB1Q9Y5G3 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGB1Q9Y5G3 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.61■□□□□ 0.89
PCDHGB1Q9Y5G3 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
PCDHGB1Q9Y5G3 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGB1Q9Y5G3 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.61■□□□□ 0.89
PCDHGB1Q9Y5G3 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.61■□□□□ 0.89
PCDHGB1Q9Y5G3 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGB1Q9Y5G3 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGB1Q9Y5G3 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGB1Q9Y5G3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDHGB1Q9Y5G3 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PCDHGB1Q9Y5G3 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGB1Q9Y5G3 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.6■□□□□ 0.89
PCDHGB1Q9Y5G3 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
PCDHGB1Q9Y5G3 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.6■□□□□ 0.89
PCDHGB1Q9Y5G3 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGB1Q9Y5G3 SLC25A24-204ENST00000569674 2357 ntBASIC20.6■□□□□ 0.89
PCDHGB1Q9Y5G3 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGB1Q9Y5G3 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
PCDHGB1Q9Y5G3 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGB1Q9Y5G3 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
PCDHGB1Q9Y5G3 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGB1Q9Y5G3 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDHGB1Q9Y5G3 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGB1Q9Y5G3 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PCDHGB1Q9Y5G3 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.59■□□□□ 0.89
PCDHGB1Q9Y5G3 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.59■□□□□ 0.89
PCDHGB1Q9Y5G3 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGB1Q9Y5G3 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGB1Q9Y5G3 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.59■□□□□ 0.89
PCDHGB1Q9Y5G3 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHGB1Q9Y5G3 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHGB1Q9Y5G3 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
PCDHGB1Q9Y5G3 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.58■□□□□ 0.88
PCDHGB1Q9Y5G3 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.57■□□□□ 0.88
PCDHGB1Q9Y5G3 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGB1Q9Y5G3 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGB1Q9Y5G3 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGB1Q9Y5G3 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGB1Q9Y5G3 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.57■□□□□ 0.88
PCDHGB1Q9Y5G3 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.57■□□□□ 0.88
PCDHGB1Q9Y5G3 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.57■□□□□ 0.88
PCDHGB1Q9Y5G3 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGB1Q9Y5G3 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGB1Q9Y5G3 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGB1Q9Y5G3 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
PCDHGB1Q9Y5G3 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PCDHGB1Q9Y5G3 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.56■□□□□ 0.88
PCDHGB1Q9Y5G3 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGB1Q9Y5G3 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGB1Q9Y5G3 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.56■□□□□ 0.88
PCDHGB1Q9Y5G3 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGB1Q9Y5G3 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGB1Q9Y5G3 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDHGB1Q9Y5G3 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGB1Q9Y5G3 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGB1Q9Y5G3 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
PCDHGB1Q9Y5G3 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGB1Q9Y5G3 NTF6A-201ENST00000591175 560 ntBASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms