Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
PCDHB13Q9Y5F0 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
PCDHB13Q9Y5F0 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
PCDHB13Q9Y5F0 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC24.92■■□□□ 1.58
PCDHB13Q9Y5F0 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
PCDHB13Q9Y5F0 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
PCDHB13Q9Y5F0 CASK-201ENST00000378154 2494 ntTSL 5 BASIC24.92■■□□□ 1.58
PCDHB13Q9Y5F0 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
PCDHB13Q9Y5F0 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHB13Q9Y5F0 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHB13Q9Y5F0 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHB13Q9Y5F0 GRAMD4P7-201ENST00000578182 1232 ntBASIC24.91■■□□□ 1.58
PCDHB13Q9Y5F0 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
PCDHB13Q9Y5F0 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHB13Q9Y5F0 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC24.91■■□□□ 1.58
PCDHB13Q9Y5F0 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
PCDHB13Q9Y5F0 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHB13Q9Y5F0 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHB13Q9Y5F0 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHB13Q9Y5F0 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
PCDHB13Q9Y5F0 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
PCDHB13Q9Y5F0 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHB13Q9Y5F0 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHB13Q9Y5F0 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
PCDHB13Q9Y5F0 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC24.89■■□□□ 1.58
PCDHB13Q9Y5F0 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.57
PCDHB13Q9Y5F0 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.57
PCDHB13Q9Y5F0 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC24.89■■□□□ 1.57
PCDHB13Q9Y5F0 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC24.89■■□□□ 1.57
PCDHB13Q9Y5F0 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
PCDHB13Q9Y5F0 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHB13Q9Y5F0 AL356441.2-201ENST00000443009 864 ntBASIC24.88■■□□□ 1.57
PCDHB13Q9Y5F0 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
PCDHB13Q9Y5F0 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC24.88■■□□□ 1.57
PCDHB13Q9Y5F0 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC24.88■■□□□ 1.57
PCDHB13Q9Y5F0 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHB13Q9Y5F0 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHB13Q9Y5F0 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC24.87■■□□□ 1.57
PCDHB13Q9Y5F0 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC24.87■■□□□ 1.57
PCDHB13Q9Y5F0 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC24.87■■□□□ 1.57
PCDHB13Q9Y5F0 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC24.87■■□□□ 1.57
PCDHB13Q9Y5F0 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
PCDHB13Q9Y5F0 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
PCDHB13Q9Y5F0 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
PCDHB13Q9Y5F0 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
PCDHB13Q9Y5F0 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC24.87■■□□□ 1.57
PCDHB13Q9Y5F0 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC24.86■■□□□ 1.57
PCDHB13Q9Y5F0 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHB13Q9Y5F0 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC24.86■■□□□ 1.57
PCDHB13Q9Y5F0 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHB13Q9Y5F0 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
PCDHB13Q9Y5F0 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC24.86■■□□□ 1.57
PCDHB13Q9Y5F0 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC24.86■■□□□ 1.57
PCDHB13Q9Y5F0 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
PCDHB13Q9Y5F0 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHB13Q9Y5F0 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHB13Q9Y5F0 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
PCDHB13Q9Y5F0 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC24.85■■□□□ 1.57
PCDHB13Q9Y5F0 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHB13Q9Y5F0 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
PCDHB13Q9Y5F0 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHB13Q9Y5F0 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHB13Q9Y5F0 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHB13Q9Y5F0 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHB13Q9Y5F0 ANOS2P-203ENST00000472227 1816 ntBASIC24.84■■□□□ 1.57
PCDHB13Q9Y5F0 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC24.84■■□□□ 1.57
PCDHB13Q9Y5F0 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHB13Q9Y5F0 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC24.84■■□□□ 1.57
PCDHB13Q9Y5F0 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHB13Q9Y5F0 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC24.84■■□□□ 1.57
PCDHB13Q9Y5F0 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHB13Q9Y5F0 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
PCDHB13Q9Y5F0 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
PCDHB13Q9Y5F0 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
PCDHB13Q9Y5F0 AK3-203ENST00000447596 705 ntTSL 2 BASIC24.83■■□□□ 1.57
PCDHB13Q9Y5F0 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.56
PCDHB13Q9Y5F0 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
PCDHB13Q9Y5F0 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
PCDHB13Q9Y5F0 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
PCDHB13Q9Y5F0 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC24.82■■□□□ 1.56
PCDHB13Q9Y5F0 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC24.82■■□□□ 1.56
PCDHB13Q9Y5F0 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC24.82■■□□□ 1.56
PCDHB13Q9Y5F0 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
PCDHB13Q9Y5F0 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC24.82■■□□□ 1.56
PCDHB13Q9Y5F0 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
PCDHB13Q9Y5F0 AL356740.2-201ENST00000601559 647 ntBASIC24.82■■□□□ 1.56
PCDHB13Q9Y5F0 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
PCDHB13Q9Y5F0 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC24.82■■□□□ 1.56
PCDHB13Q9Y5F0 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
PCDHB13Q9Y5F0 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHB13Q9Y5F0 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHB13Q9Y5F0 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC24.81■■□□□ 1.56
PCDHB13Q9Y5F0 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHB13Q9Y5F0 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHB13Q9Y5F0 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHB13Q9Y5F0 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHB13Q9Y5F0 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHB13Q9Y5F0 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHB13Q9Y5F0 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHB13Q9Y5F0 AC092068.2-201ENST00000590491 1708 ntBASIC24.81■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms